RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SEC14L1Q92503 715 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 KAT5Q92993 513 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 GPRASP2Q96D09 838 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 CHRNB2P17787 502 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 CCND2P30279 289 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 BACE1P56817 501 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 SKOR1P84550 965 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 NBPF12Q5TAG4 269 aaPredicted RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 RPUSD2Q8IZ73 545 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 PROCA1Q8NCQ7 364 aaPredicted RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 C1orf131Q8NDD1 294 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 PCDHB18PQ96TA0 734 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 NTPCRQ9BSD7 190 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 CARD9Q9H257 536 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 HACL1Q9UJ83 578 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 NOCTQ9UK39 431 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 PCDHA10Q9Y5I2 948 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 DOCK1Q14185 1865 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 RLFQ13129 1914 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 FGGP02679 453 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 FTLP02792 175 aaPredicted RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 NR3C2P08235 984 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 SMTNP53814 917 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 SNRNP35Q16560 246 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 SAMD7Q7Z3H4 446 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 DDX42Q86XP3 938 aaKnown RBP eCLIP19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 SPIRE2Q8WWL2 714 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 SEMA4DQ92854 862 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 KREMEN1Q96MU8 473 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 NEUROG2Q9H2A3 272 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 AMACRQ9UHK6 382 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 TCEAL9Q9UHQ7 104 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 ZNF112Q9UJU3 913 aa19.84■□□□□ 0.77
SEMA3B-209ENST00000456560 CCDC169A6NNP5 214 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 MAFGO15525 162 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 SGPL1O95470 568 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 IRAK1P51617 712 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 C11orf63Q6NUN7 778 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 TRMT1LQ7Z2T5 733 aaKnown RBP19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 NLRX1Q86UT6 975 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 CCDC26Q8TAB7 109 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 BSNDQ8WZ55 320 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 COQ4Q9Y3A0 265 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 NR2E1Q9Y466 385 aa19.83■□□□□ 0.77
SEMA3B-209ENST00000456560 PFASO15067 1338 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 WDR81Q562E7 1941 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 ZNF862O60290 1169 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 RTN2O75298 545 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 KRT14P02533 472 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 CNGA1P29973 690 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 HLTFQ14527 1009 aaKnown RBP eCLIP19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 TBC1D10BQ4KMP7 808 aaPredicted RBP19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 MAATS1Q7Z4T9 603 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 MICALL2Q8IY33 904 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 SCYL3Q8IZE3 742 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 PARD3BQ8TEW8 1205 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 FBXL18Q96ME1 805 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 KIFC3Q9BVG8 833 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 CAPS2Q9BXY5 557 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 ADAMTS5Q9UNA0 930 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 ALG6Q9Y672 507 aa19.83■□□□□ 0.76
SEMA3B-209ENST00000456560 GZMAP12544 262 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 KCNA2P16389 499 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 GMPSP49915 693 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 GPC5P78333 572 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 MAP2K1Q02750 393 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 DMP1Q13316 513 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 EMC10Q5UCC4 262 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 KRT39Q6A163 491 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 SLC39A4Q6P5W5 647 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 NOP9Q86U38 636 aaKnown RBP19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 EFCAB13Q8IY85 973 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 EPS8L1Q8TE68 723 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 SHC3Q92529 594 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 KIFAP3Q92845 792 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 SAAL1Q96ER3 474 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 RNPC3Q96LT9 517 aaKnown RBP19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 MFSD14AQ96MC6 490 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 PDLIM7Q9NR12 457 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 DENND3A2RUS2 1198 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 TTI1O43156 1089 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 RGS20O76081 388 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 LRIG3Q6UXM1 1119 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 OTUD6AQ7L8S5 288 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 TMC2Q8TDI7 906 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 ALG3Q92685 438 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 C17orf75Q9HAS0 396 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 KMT5AQ9NQR1 393 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 GABBR1Q9UBS5 961 aa19.82■□□□□ 0.76
SEMA3B-209ENST00000456560 FAM170AA1A519 330 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 MTA2O94776 668 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 DSG3P32926 999 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 GPC3P51654 580 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 OAZ1P54368 228 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 MFAP3P55082 362 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 DCAF15Q66K64 600 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 HELQQ8TDG4 1101 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 C12orf42Q96LP6 360 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 AS3MTQ9HBK9 375 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms