RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 GALNT17Q6IS24 598 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 FERMT3Q86UX7 667 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 C4orf19Q8IY42 314 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 FLCNQ8NFG4 579 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 URGCPQ8TCY9 931 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 PSPC1Q8WXF1 523 aaKnown RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 SLC7A3Q8WY07 619 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 FAM20AQ96MK3 541 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 WDR6Q9NNW5 1121 aaKnown RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 IGSF9Q9P2J2 1179 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 KCNJ14Q9UNX9 436 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 IPPQ9Y573 584 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 RFC5P40937 340 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 DSG1Q02413 1049 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 EARS2Q5JPH6 523 aaKnown RBP13.29□□□□□ -0.28
LMCD1-206ENST00000456506 RSAD2Q8WXG1 361 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 NKD2Q969F2 451 aaPredicted RBP13.29□□□□□ -0.28
LMCD1-206ENST00000456506 CEP170P1Q96L14 293 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 MYADMQ96S97 322 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 LARP6Q9BRS8 491 aaKnown RBP13.29□□□□□ -0.28
LMCD1-206ENST00000456506 LXNQ9BS40 222 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 MFSD1Q9H3U5 465 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 RGL1Q9NZL6 768 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 KANSL3Q9P2N6 904 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 CACNA1IQ9P0X4 2223 aa13.29□□□□□ -0.28
LMCD1-206ENST00000456506 PTPRZ1P23471 2315 aaPredicted RBP13.29□□□□□ -0.28
LMCD1-206ENST00000456506 CCDC195A0A1B0GUA6 201 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 C2CD2LO14523 706 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 TBX3O15119 743 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 RFPL2O75678 378 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 C1RP00736 705 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 PSMA5P28066 241 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 YWHABP31946 246 aaKnown RBP13.28□□□□□ -0.28
LMCD1-206ENST00000456506 PTENP60484 403 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 EMC2Q15006 297 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 EPHA7Q15375 998 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 LILRA6Q6PI73 481 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 KRT25Q7Z3Z0 450 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 SIX5Q8N196 739 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 RNF149Q8NC42 400 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 CNNM3Q8NE01 707 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 OXER1Q8TDS5 423 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 GAD1Q99259 594 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
LMCD1-206ENST00000456506 DLGAP2Q9P1A6 1054 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 WNT16Q9UBV4 365 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 HES2Q9Y543 173 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 CLUHO75153 1309 aa13.28□□□□□ -0.28
LMCD1-206ENST00000456506 CITO14578 2027 aa13.27□□□□□ -0.28
LMCD1-206ENST00000456506 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 ASAP2O43150 1006 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 GAS2O43903 313 aaKnown RBP13.27□□□□□ -0.29
LMCD1-206ENST00000456506 SLITRK3O94933 977 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 URODP06132 367 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 MLH1P40692 756 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 GLUD2P49448 558 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 SCNN1GP51170 649 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 AK2P54819 239 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 FOXK2Q01167 660 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 MBTD1Q05BQ5 628 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 ANGPT1Q15389 498 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 NEK8Q86SG6 692 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 SLC44A3Q8N4M1 653 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 HDAC7Q8WUI4 952 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 TCP11Q8WWU5 503 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 DYDC2Q96IM9 177 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 B3GALT6Q96L58 329 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.29
LMCD1-206ENST00000456506 RTP3Q9BQQ7 232 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 TM6SF1Q9BZW5 370 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 PRG3Q9Y2Y8 225 aaPredicted RBP13.27□□□□□ -0.29
LMCD1-206ENST00000456506 STK36Q9NRP7 1315 aa13.27□□□□□ -0.29
LMCD1-206ENST00000456506 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 EPB41L2O43491 1005 aaKnown RBP13.26□□□□□ -0.29
LMCD1-206ENST00000456506 DKC1O60832 514 aaKnown RBP eCLIP13.26□□□□□ -0.29
LMCD1-206ENST00000456506 DTNBO60941 627 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 GLUD1P00367 558 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 ADH1AP07327 375 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 CFHP08603 1231 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 ITGA4P13612 1032 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 GCFC2P16383 781 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms