RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 MYO1FO00160 1098 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 CORO7P57737 925 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 PSMC5P62195 406 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 TMC3Q7Z5M5 1100 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 FMNL3Q8IVF7 1028 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 AGBL3Q8NEM8 1001 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 PDCD2LQ9BRP1 358 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 FZD1Q9UP38 647 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 CHRNB2P17787 502 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 COMTP21964 271 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 PTENP60484 403 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 GPC5P78333 572 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 ATP8B4Q8TF62 1192 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 BSNDQ8WZ55 320 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 SNX24Q9Y343 169 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
SEMA4D-213ENST00000455551 WDR64B1ANS9 1081 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 KCNA3P22001 575 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 NPTX2P47972 431 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 ODF2Q5BJF6 829 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■■■■ 46.7
SEMA4D-213ENST00000455551 PXMP2Q9NR77 195 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 USP20Q9Y2K6 914 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 BHMG1C9JSJ3 638 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 ANO5Q75V66 913 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 TAS1R2Q8TE23 839 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 LPAR1Q92633 364 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 FMO2Q99518 471 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 FAM114A2Q9NRY5 505 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
SEMA4D-213ENST00000455551 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 RXRBP28702 533 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 CNGA1P29973 690 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 PLTPP55058 493 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 LRIG3Q6UXM1 1119 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 C12orf56Q8IXR9 622 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 TMEM161BQ8NDZ6 487 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 TSPYL1Q9H0U9 437 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 PPANQ9NQ55 473 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 KMT5AQ9NQR1 393 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 NOCTQ9UK39 431 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 TTC7AQ9ULT0 858 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 JAMLQ86YT9 394 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 ZSWIM1Q9BR11 485 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 RAB17Q9H0T7 212 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 GABBR1Q9UBS5 961 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 NOVA2Q9UNW9 492 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 TCRBV7S2A1N4TA0A589 114 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 P4HA2O15460 535 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 RTN2O75298 545 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 CLSTN1O94985 981 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 LYPLA2O95372 231 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 TMOD1P28289 359 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 MDH1P40925 334 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 SMTNP53814 917 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 FAM71AQ8IYT1 594 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 ZNF653Q96CK0 615 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 TEPSINQ96N21 525 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 NUP85Q9BW27 656 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
SEMA4D-213ENST00000455551 SPOPO43791 374 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 ZBED4O75132 1171 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 JAK3P52333 1124 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 FMO1Q01740 532 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 ERP44Q9BS26 406 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms