RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MTCL1Q9Y4B5 1905 aaKnown RBP8.96□□□□□ -0.97
NIF3L1-209ENST00000454952 C2orf16Q68DN1 1984 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 CCDC194A0A1B0GVG4 234 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 TBX3O15119 743 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 MARCH6O60337 910 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 CSDE1O75534 798 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 ERLIN2O94905 339 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 STBD1O95210 358 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 TDP2O95551 362 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 PDGFBP01127 241 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 ASGR2P07307 311 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 ADH1AP07327 375 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 AXLP30530 894 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 SLC11A1P49279 550 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 CLCN4P51793 760 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 CCT2P78371 535 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 CREMQ03060 361 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 MXD4Q14582 209 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 LETM2Q2VYF4 491 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 PPP4R3AQ6IN85 833 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 TMC5Q6UXY8 1006 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 ANO5Q75V66 913 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 RUFY3Q7L099 469 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 TMEM173Q86WV6 379 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 C12orf76Q8N812 135 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 TMEM105Q8N8V8 129 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 AUTS2Q8WXX7 1259 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 NKD2Q969F2 451 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 NXPE3Q969Y0 559 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 ZNF274Q96GC6 653 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 KLHL5Q96PQ7 755 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 DHX33Q9H6R0 707 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 IFT122Q9HBG6 1241 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 NCOA5Q9HCD5 579 aaKnown RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 DAXXQ9UER7 740 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 FBXL21Q9UKT6 434 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 CYP46A1Q9Y6A2 500 aa8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 ZFHX2Q9C0A1 2572 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-209ENST00000454952 M0R2N6 131 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 EDIL3O43854 480 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 BAG4O95429 457 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 GLUD1P00367 558 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 SOD2P04179 222 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 CNPP09543 421 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 WEE2P0C1S8 567 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 SRGAP2CP0DJJ0 459 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 ITGA4P13612 1032 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 NCLP19338 710 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 RFX1P22670 979 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 LAMTOR4Q0VGL1 99 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 TFDP1Q14186 410 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 INF2Q27J81 1249 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 LONRF3Q496Y0 759 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 PLA2G4FQ68DD2 849 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 NOTUMQ6P988 496 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 AGMOQ6ZNB7 445 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 NEK8Q86SG6 692 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 KSR1Q8IVT5 923 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 C4orf19Q8IY42 314 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 SLFN12Q8IYM2 578 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 FLCNQ8NFG4 579 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 PRPF31Q8WWY3 499 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 GJA10Q969M2 543 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 RPS6KC1Q96S38 1066 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 HERC2P3Q9BVR0 1158 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 TM6SF1Q9BZW5 370 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 ZSWIM4Q9H7M6 989 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 DNAJB4Q9UDY4 337 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 CDH22Q9UJ99 828 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 DUSP12Q9UNI6 340 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 ZMYM2Q9UBW7 1377 aa8.95□□□□□ -0.98
NIF3L1-209ENST00000454952 ARID2Q68CP9 1835 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 TMEM150BA6NC51 233 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 PRR23AA6NEV1 266 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 NRP1O14786 923 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 INPPL1O15357 1258 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 LILRB3O75022 631 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 SSBP05455 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 AOC1P19801 751 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 YWHABP31946 246 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 GLUD2P49448 558 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 AK2P54819 239 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 POU5F1BQ06416 359 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 MMRN1Q13201 1228 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 EMC2Q15006 297 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 EPHA7Q15375 998 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 FERMT3Q86UX7 667 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 ZNF280BQ86YH2 543 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 CCDC105Q8IYK2 499 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 RNF149Q8NC42 400 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 BCL7CQ8WUZ0 217 aaPredicted RBP8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 WASF1Q92558 559 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 TMEM143Q96AN5 459 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 CCDC43Q96MW1 224 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 MTRQ99707 1265 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms