RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 AUTS2Q8WXX7 1259 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 GAD1Q99259 594 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 C1QTNF1Q9BXJ1 281 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 TRIM6Q9C030 488 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-205ENST00000454244 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 NXF3Q9H4D5 531 aaKnown RBP11.92□□□□□ -0.5
LMCD1-205ENST00000454244 POLD4Q9HCU8 107 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 UBN1Q9NPG3 1134 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 PRMT7Q9NVM4 692 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-205ENST00000454244 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-205ENST00000454244 STK24Q9Y6E0 443 aa11.92□□□□□ -0.5
LMCD1-205ENST00000454244 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 A0A1B0GUA9 196 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 ALDH2P05091 517 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 LIG1P18858 919 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 CDC25AP30304 524 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 MLH1P40692 756 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 NAMPTP43490 491 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 SCNN1GP51170 649 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 KCNC3Q14003 757 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 KRT79Q5XKE5 535 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 LARP1BQ659C4 914 aaKnown RBP11.91□□□□□ -0.5
LMCD1-205ENST00000454244 ANKRD54Q6NXT1 300 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 TMEM184AQ6ZMB5 413 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 TMEM175Q9BSA9 504 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 APOL5Q9BWW9 433 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 C2orf40Q9H1Z8 148 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 FZD8Q9H461 694 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 MIOSQ9NXC5 875 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 FAN1Q9Y2M0 1017 aa11.91□□□□□ -0.5
LMCD1-205ENST00000454244 PRG3Q9Y2Y8 225 aaPredicted RBP11.91□□□□□ -0.5
LMCD1-205ENST00000454244 USP15Q9Y4E8 981 aaPredicted RBP11.91□□□□□ -0.5
LMCD1-205ENST00000454244 ARID2Q68CP9 1835 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.9□□□□□ -0.5
LMCD1-205ENST00000454244 ARL5CA6NH57 179 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 E9PMD0 336 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 PI4K2BG5E9Z4 385 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 NRP1O14786 923 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 INPPL1O15357 1258 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 CLASP2O75122 1294 aaKnown RBP11.9□□□□□ -0.5
LMCD1-205ENST00000454244 PRKCBP05771 671 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 CTSAP10619 480 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 AKAP5P24588 427 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 ATP2C1P98194 919 aaPredicted RBP11.9□□□□□ -0.5
LMCD1-205ENST00000454244 PPP2R5AQ15172 486 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 ZRSR1Q15695 479 aaKnown RBP11.9□□□□□ -0.5
LMCD1-205ENST00000454244 MAPK6Q16659 721 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 FAM187BQ17R55 369 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 SYCE2Q6PIF2 218 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 COLGALT2Q8IYK4 626 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 KIFAP3Q92845 792 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 CASP10Q92851 521 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 IFT74Q96LB3 600 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 ZFP42Q96MM3 310 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
LMCD1-205ENST00000454244 MMTAG2Q9BU76 263 aaKnown RBP11.9□□□□□ -0.5
LMCD1-205ENST00000454244 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 KLK14Q9P0G3 267 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 PARP2Q9UGN5 583 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 USP20Q9Y2K6 914 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 GIT1Q9Y2X7 761 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 HCFC2Q9Y5Z7 792 aa11.9□□□□□ -0.5
LMCD1-205ENST00000454244 REV3LO60673 3130 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 N4BP3O15049 544 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 SSBP05455 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
LMCD1-205ENST00000454244 COL9A1P20849 921 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 OR1G1P47890 313 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 DSC1Q08554 894 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 PRPF4BQ13523 1007 aaKnown RBP11.89□□□□□ -0.51
LMCD1-205ENST00000454244 GIT2Q14161 759 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 EEF1DP3Q658K8 133 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 RUSC1Q9BVN2 902 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 CCDC113Q9H0I3 377 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 S1PR5Q9H228 398 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 PDZD7Q9H5P4 517 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 MARCH5Q9NX47 278 aa11.89□□□□□ -0.51
LMCD1-205ENST00000454244 VCANP13611 3396 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 FAM86C2PA6NEL3 165 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 ACKR2O00590 384 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 DCXO43602 365 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 EDN1P05305 212 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 ALADP13716 330 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 HOXB8P17481 243 aaPredicted RBP11.88□□□□□ -0.51
LMCD1-205ENST00000454244 EFNA5P52803 228 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 CUL4AQ13619 759 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 PTPN14Q15678 1187 aa11.88□□□□□ -0.51
LMCD1-205ENST00000454244 TMEM31Q5JXX7 168 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms