RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SFR1Q86XK3 245 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 RNF169Q8NCN4 708 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 SMG8Q8ND04 991 aaKnown RBP30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 SLC17A8Q8NDX2 589 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 PGBD4Q96DM1 585 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 ACO2Q99798 780 aaKnown RBP30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 MRPL4Q9BYD3 311 aaKnown RBP30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 ST6GALNAC4Q9H4F1 302 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 PANK4Q9NVE7 773 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 CDH23Q9H251 3354 aa30.76■■■□□ 2.52
SMARCC1-203ENST00000454240 K7ENM7 598 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 NMT1P30419 496 aaKnown RBP30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 STRN3Q13033 797 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 BTG3Q14201 252 aaPredicted RBP30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 CLLU1OSQ5K130 101 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 ATF7IP2Q5U623 682 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 FIBCD1Q8N539 461 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 LPPQ93052 612 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 TNFSF13BQ9Y275 285 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 IPPQ9Y573 584 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 CHD7Q9P2D1 2997 aa30.76■■■□□ 2.51
SMARCC1-203ENST00000454240 KIAA1671Q9BY89 1806 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 MEIS3P2A8K0S8 358 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 AFMP43652 599 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 GTF2BQ00403 316 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 HERC4Q5GLZ8 1057 aaPredicted RBP30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 EEF1DP3Q658K8 133 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 ZNF720Q7Z2F6 126 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 CCDC65Q8IXS2 484 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 DEFB123Q8N688 67 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 PAGE5Q96GU1 130 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 CASD1Q96PB1 797 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 TMEM117Q9H0C3 514 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 OLFML3Q9NRN5 406 aa30.75■■■□□ 2.51
SMARCC1-203ENST00000454240 TBKBP1A7MCY6 615 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 ZNF202O95125 648 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 NPTXRO95502 500 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 LINC00271P0C7V0 271 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 ABCD1P33897 745 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 TMEM132AQ24JP5 1023 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 PAN2Q504Q3 1202 aaKnown RBP30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 AGMOQ6ZNB7 445 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 SPRED2Q7Z698 418 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 TMEM87AQ8NBN3 555 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 TARS2Q9BW92 718 aaKnown RBP30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 TRIM6Q9C030 488 aaPredicted RBP30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 PTPRHQ9HD43 1115 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 TBX20Q9UMR3 447 aa30.74■■■□□ 2.51
SMARCC1-203ENST00000454240 CASP1P29466 404 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 ERVK-21P61565 698 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 ASIC1P78348 528 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 GRAMD1CQ8IYS0 662 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 CLP1Q92989 425 aaKnown RBP30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 FAM161BQ96MY7 647 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 TGS1Q96RS0 853 aaKnown RBP30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 ADPGKQ9BRR6 497 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 STRA6Q9BX79 667 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 BLZF1Q9H2G9 400 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 HES2Q9Y543 173 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 MYO9BQ13459 2157 aa30.73■■■□□ 2.51
SMARCC1-203ENST00000454240 OFD1O75665 1012 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 PPP1R37O75864 691 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 ITGA4P13612 1032 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 PROZP22891 400 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 COASYQ13057 564 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 CUL4BQ13620 913 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 ZC2HC1CQ53FD0 456 aaPredicted RBP30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 ZPBP2Q6X784 338 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 ABI1Q8IZP0 508 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 FMR1NBQ8N0W7 255 aaPredicted RBP30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 HELQQ8TDG4 1101 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 RSPH1Q8WYR4 309 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 RNF39Q9H2S5 420 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 NXF3Q9H4D5 531 aaKnown RBP30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 MRPL44Q9H9J2 332 aaKnown RBP30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 MTMR10Q9NXD2 777 aa30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 MRPL42Q9Y6G3 142 aaKnown RBP30.72■■■□□ 2.51
SMARCC1-203ENST00000454240 GRIN2CQ14957 1233 aa30.71■■■□□ 2.51
SMARCC1-203ENST00000454240 KRBA2Q6ZNG9 492 aa30.71■■■□□ 2.51
SMARCC1-203ENST00000454240 UNC13DQ70J99 1090 aa30.71■■■□□ 2.51
SMARCC1-203ENST00000454240 ENGASEQ8NFI3 743 aa30.71■■■□□ 2.51
SMARCC1-203ENST00000454240 UBN1Q9NPG3 1134 aa30.71■■■□□ 2.51
SMARCC1-203ENST00000454240 TBC1D7Q9P0N9 293 aa30.71■■■□□ 2.51
SMARCC1-203ENST00000454240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 ABLIM1O14639 778 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 SNW1Q13573 536 aaKnown RBP30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 DCAF4L1Q3SXM0 396 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 GLB1LQ6UWU2 654 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 CLEC17AQ6ZS10 378 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 LRRC55Q6ZSA7 311 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 HACE1Q8IYU2 909 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 HVCN1Q96D96 273 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 SAMD11Q96NU1 681 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 C17orf80Q9BSJ5 609 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 CERS4Q9HA82 394 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 RSAD1Q9HA92 442 aa30.7■■■□□ 2.51
SMARCC1-203ENST00000454240 PVALEFA0A1B0GWK0 134 aa30.69■■■□□ 2.5
SMARCC1-203ENST00000454240 TOM1L1O75674 476 aa30.69■■■□□ 2.5
SMARCC1-203ENST00000454240 PIGRP01833 764 aa30.69■■■□□ 2.5
SMARCC1-203ENST00000454240 MYL1P05976 194 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms