RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ST20-MTHFSA0A0A6YYL1 179 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 A0A1W2PR48 441 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 PIPSLA2A3N6 862 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 STC2O76061 302 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 LY86O95711 162 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 GASTP01350 101 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 PFKMP08237 780 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 HSP90B1P14625 803 aaKnown RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 ZSCAN20P17040 1043 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 HK1P19367 917 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 XPAP23025 273 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 IL12RB1P42701 662 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 GJC2Q5T442 439 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 PIK3R6Q5UE93 754 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 ZKSCAN2Q63HK3 967 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 CDCA2Q69YH5 1023 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 CCDC62Q6P9F0 684 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 LILRA3Q8N6C8 439 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 PIK3C3Q8NEB9 887 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 OR5M3Q8NGP4 307 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 FUBP1Q96AE4 644 aaKnown RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 CPEB1Q9BZB8 566 aaKnown RBP3.47□□□□□ -1.85
LRCH3-209ENST00000452660 POFUT1Q9H488 388 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 AKIP1Q9NQ31 210 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 OXSMQ9NWU1 459 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 ING3Q9NXR8 418 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 ZKSCAN5Q9Y2L8 839 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 NUMBLQ9Y6R0 609 aa3.47□□□□□ -1.85
LRCH3-209ENST00000452660 MARCH11A6NNE9 402 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 PRR5-ARHGAP8B1AHC4 643 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 RAPGEF3O95398 923 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 F2P00734 622 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 RBP3P10745 1247 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 SLC9A1P19634 815 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 MXRA7P84157 204 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 OCRLQ01968 901 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 DUSP2Q05923 314 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 CD69Q07108 199 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 SF3A1Q15459 793 aaKnown RBP3.46□□□□□ -1.86
LRCH3-209ENST00000452660 CFAP100Q494V2 611 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 UNQ6494/PRO21346Q6UXR6 183 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 GLB1L2Q8IW92 636 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 LCORLQ8N3X6 602 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 LILRB2Q8N423 598 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 TOMM22Q9NS69 142 aa3.46□□□□□ -1.86
LRCH3-209ENST00000452660 EPN1Q9Y6I3 576 aaPredicted RBP3.46□□□□□ -1.86
LRCH3-209ENST00000452660 SETD1BQ9UPS6 1966 aaKnown RBP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 KIAA0355O15063 1070 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 GAS7O60861 476 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 ESRRBO95718 433 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 LTA4HP09960 611 aaKnown RBP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 ATP2A2P16615 1042 aaKnown RBP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 APOBEC3AP31941 199 aaPredicted RBP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 CLK3P49761 638 aaKnown RBP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 SEC24CP53992 1094 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 GUCY1B3Q02153 619 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 DSG1Q02413 1049 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 NHLH1Q02575 133 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 FAM214AQ32MH5 1076 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 RD3Q7Z3Z2 195 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 WDR11Q9BZH6 1224 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 EPC1Q9H2F5 836 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF768Q9H5H4 540 aaKnown RBP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 IFT57Q9NWB7 429 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.45□□□□□ -1.86
LRCH3-209ENST00000452660 TRPM5Q9NZQ8 1165 aa3.45□□□□□ -1.86
LRCH3-209ENST00000452660 ELL2O00472 640 aaPredicted RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 PJA2O43164 708 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 APOL3O95236 402 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 C1RP00736 705 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 JMJD7P0C870 316 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 EGR2P11161 476 aaPredicted RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 CASRP41180 1078 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 RBM25P49756 843 aaKnown RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF460Q14592 562 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 LMBR1LQ6UX01 489 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 BTNL9Q6UXG8 535 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 PDZD4Q76G19 769 aaPredicted RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF610Q8N9Z0 462 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 FAM98AQ8NCA5 519 aaKnown RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 GAB3Q8WWW8 586 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 RTF1Q92541 710 aaKnown RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 NAF1Q96HR8 494 aaKnown RBP3.44□□□□□ -1.86
LRCH3-209ENST00000452660 OSBPL2Q9H1P3 480 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 TMEM260Q9NX78 707 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 PODXL2Q9NZ53 605 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 MAST3O60307 1309 aa3.44□□□□□ -1.86
LRCH3-209ENST00000452660 TBKBP1A7MCY6 615 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 ZNF185O15231 689 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 NCR1O76036 304 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 PCDH8O95206 1070 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 DDX6P26196 483 aaKnown RBP eCLIP3.43□□□□□ -1.86
LRCH3-209ENST00000452660 LSP1P33241 339 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 CRHR1P34998 444 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 FAM189BP81408 668 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 APBA1Q02410 837 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 NHLH2Q02577 135 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 MPP3Q13368 585 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 BMT2Q1RMZ1 405 aa3.43□□□□□ -1.86
LRCH3-209ENST00000452660 SIMC1Q8NDZ2 872 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms