RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LIX1LQ8IVB5 337 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZC3H7AQ8IWR0 971 aaKnown RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 MRPL41Q8IXM3 137 aaKnown RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 CRACR2BQ8N4Y2 399 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 CCDC33Q8N5R6 958 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 MFSD2AQ8NA29 543 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 AGBL5Q8NDL9 886 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZMIZ2Q8NF64 920 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 CNDP2Q96KP4 475 aaKnown RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 DPH2Q9BQC3 489 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 GPATCH1Q9BRR8 931 aaKnown RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 CNPPD1Q9BV87 410 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 PAK6Q9NQU5 681 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 TJP2Q9UDY2 1190 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 TBC1D29Q9UFV1 150 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 ADAM30Q9UKF2 790 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 DENND2AQ9ULE3 1009 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 NOC2LQ9Y3T9 749 aaKnown RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 KNSTRNQ9Y448 316 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 C17orf113A0A1B0GUU1 675 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PTPDC1A2A3K4 754 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 POM121BA6NF01 834 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 GNAT3A8MTJ3 354 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 IGF2BP3O00425 579 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 DAPK3O43293 454 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 DTNBO60941 627 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 TBCAO75347 108 aaKnown RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PPM1BO75688 479 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 CST3P01034 146 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 MT-ND3P03897 115 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC159P0C7I6 412 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PDCP20941 246 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 C5AR1P21730 350 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ITGA8P53708 1063 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 NR1H2P55055 460 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 SH3BGRP55822 239 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 EVCP57679 992 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ARF3P61204 181 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ARF1P84077 181 aaKnown RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PRKCQQ04759 706 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 MAP4K2Q12851 820 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 IFT88Q13099 833 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMED1Q13445 227 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 TRPC3Q13507 836 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 CUL4AQ13619 759 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PFKFB4Q16877 469 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PGS1Q32NB8 556 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ARL13BQ3SXY8 428 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZACNQ401N2 412 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ANO6Q4KMQ2 910 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 LRCH2Q5VUJ6 765 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 LETMD1Q6P1Q0 360 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 POMZP3Q6PJE2 187 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ABRAXAS1Q6UWZ7 409 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 USP45Q70EL2 814 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 EPHX4Q8IUS5 362 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 SPACA3Q8IXA5 215 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 RTKN2Q8IZC4 609 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 TCP11L2Q8N4U5 519 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 CHST14Q8NCH0 376 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 FAM13CQ8NE31 585 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 LILRB1Q8NHL6 650 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 GSDMBQ8TAX9 411 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 XAGE3Q8WTP9 111 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 TGFBRAP1Q8WUH2 860 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ACSF2Q96CM8 615 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 MAELQ96JY0 434 aaKnown RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 HRASLS5Q96KN8 279 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 SLC6A18Q96N87 628 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 YME1L1Q96TA2 773 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 C22orf23Q9BZE7 217 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 BTBD1Q9H0C5 482 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 KLHL25Q9H0H3 589 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 GHITMQ9H3K2 345 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 DNAJC28Q9NX36 388 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 H2AFY2Q9P0M6 372 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 GTF3C4Q9UKN8 822 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PLAGL2Q9UPG8 496 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 AKT3Q9Y243 479 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PCDHA8Q9Y5H6 950 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 PCDHA11Q9Y5I1 949 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 ASXL2Q76L83 1435 aa4.96□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMEM265A0A087WTH1 108 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC66A2RUB6 948 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 FGF18O76093 207 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 URI1O94763 535 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 THP07101 528 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 CLTBP09497 229 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PRPHP41219 470 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PHKA1P46020 1223 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 NOP2P46087 812 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ALDH9A1P49189 494 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ALDH6A1Q02252 535 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF543Q08ER8 600 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 GALNT1Q10472 559 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 MAPK7Q13164 816 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PMS2P11Q13670 270 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms