RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 UBN1Q9NPG3 1134 aa13.83□□□□□ -0.2
CPSF4-208ENST00000452047 KANSL3Q9P2N6 904 aa13.83□□□□□ -0.2
CPSF4-208ENST00000452047 HCFC2Q9Y5Z7 792 aa13.83□□□□□ -0.2
CPSF4-208ENST00000452047 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 ARHGEF35A5YM69 484 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 ARL5CA6NH57 179 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 LRRIQ4A6NIV6 560 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 LOC730098B7Z3J9 87 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 CLASP2O75122 1294 aaKnown RBP13.82□□□□□ -0.2
CPSF4-208ENST00000452047 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 ALADP13716 330 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 CCT6AP40227 531 aaKnown RBP13.82□□□□□ -0.2
CPSF4-208ENST00000452047 MLH1P40692 756 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 DSC1Q08554 894 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
CPSF4-208ENST00000452047 PDIA5Q14554 519 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 FAM187BQ17R55 369 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 LLGL2Q6P1M3 1020 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 AUTS2Q8WXX7 1259 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 ZFP42Q96MM3 310 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 GAD1Q99259 594 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 FZD8Q9H461 694 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 LRWD1Q9UFC0 647 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 KIF3AQ9Y496 699 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 ZMYM2Q9UBW7 1377 aa13.82□□□□□ -0.2
CPSF4-208ENST00000452047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 TTLL13PA6NNM8 815 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 LAD1O00515 517 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 NRP1O14786 923 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 CXCL14O95715 111 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 HOXB8P17481 243 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 PRPHP41219 470 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 CBX2Q14781 532 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 PTPN14Q15678 1187 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 IL17AQ16552 155 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 CDR2LQ86X02 465 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 RNF135Q8IUD6 432 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 COLGALT2Q8IYK4 626 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 GSTCDQ8NEC7 633 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 CASP10Q92851 521 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 PHF7Q9BWX1 381 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 CCDC113Q9H0I3 377 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 BHMT2Q9H2M3 363 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-208ENST00000452047 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 MIOSQ9NXC5 875 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 GIT1Q9Y2X7 761 aa13.81□□□□□ -0.2
CPSF4-208ENST00000452047 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 NPTXRO95502 500 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 EFEMP2O95967 443 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 ALDH2P05091 517 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 EDN1P05305 212 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 GJB2P29033 226 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 NAMPTP43490 491 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 SCNN1GP51170 649 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 GIT2Q14161 759 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 BMS1Q14692 1282 aaKnown RBP13.8□□□□□ -0.2
CPSF4-208ENST00000452047 HERC4Q5GLZ8 1057 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-208ENST00000452047 ZBTB8OSQ8IWT0 167 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 RNF168Q8IYW5 571 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-208ENST00000452047 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-208ENST00000452047 APOL6Q9BWW8 343 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 RAB34Q9BZG1 259 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 C2orf40Q9H1Z8 148 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
CPSF4-208ENST00000452047 STK39Q9UEW8 545 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 FAN1Q9Y2M0 1017 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 DENND4AQ7Z401 1863 aa13.8□□□□□ -0.2
CPSF4-208ENST00000452047 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 LILRB3O75022 631 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 AKAP5P24588 427 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 CA8P35219 290 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 MCM2P49736 904 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 RILPL1Q5EBL4 403 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 MCTP1Q6DN14 999 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 HACE1Q8IYU2 909 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 SLC22A17Q8WUG5 538 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 MMTAG2Q9BU76 263 aaKnown RBP13.79□□□□□ -0.2
CPSF4-208ENST00000452047 APOL5Q9BWW9 433 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 PDZD7Q9H5P4 517 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
CPSF4-208ENST00000452047 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 TECTAO75443 2155 aa13.79□□□□□ -0.2
CPSF4-208ENST00000452047 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 F8W810 466 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 N4BP3O15049 544 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 SOD2P04179 222 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 PRKCBP05771 671 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 EPCAMP16422 314 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms