RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 VAMP4O75379 141 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ECM2O94769 699 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 IFIT1P09914 478 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 FAM228BP0C875 321 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TRIM49P0CI25 452 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TRIM49CP0CI26 452 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 VCLP18206 1134 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 LRPAP1P30533 357 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 STAT1P42224 750 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 RCAN1P53805 252 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ORC2Q13416 577 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 HAUS6Q7Z4H7 955 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 NUP93Q8N1F7 819 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 JARID2Q92833 1246 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 SH3KBP1Q96B97 665 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 MTERF3Q96E29 417 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PGM2Q96G03 612 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 AK8Q96MA6 479 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 NAPBQ9H115 298 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 DHX36Q9H2U1 1008 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 GDF3Q9NR23 364 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 IL20Q9NYY1 176 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 LRWD1Q9UFC0 647 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ANAPC5Q9UJX4 755 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PADI4Q9UM07 663 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ACTL7BQ9Y614 415 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 AK5Q9Y6K8 562 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 CDC42BPGQ6DT37 1551 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.34□□□□□ -2.04
USP53-202ENST00000450251 CHD2O14647 1828 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 ABCB11O95342 1321 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PCDH11XQ9BZA7 1347 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 YTHDC2Q9H6S0 1430 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 EXOC1LA0A1B0GW35 172 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 SSU72P8A0A1W2PR75 194 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TMEM247A6NEH6 219 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 C5orf60A6NFR6 353 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 FAM47DPA6NHR8 397 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 GNAT3A8MTJ3 354 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TCP11X1B4DZS4 312 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 M0R2C6 588 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 CAPN9O14815 690 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 SULT1B1O43704 296 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 SKAP2O75563 359 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 SPAG6O75602 509 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PSMG1O95456 288 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 RPN1P04843 607 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 INHBAP08476 426 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 HOXB6P17509 224 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 GAP43P17677 238 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ITGAXP20702 1163 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 SOX6P35712 828 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ADCY8P40145 1251 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PRIM2P49643 509 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 SNX16P57768 344 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 HPCAP84074 193 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 FAM69CQ0P6D2 419 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ART3Q13508 389 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 DGUOKQ16854 277 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TYSND1Q2T9J0 566 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 LIN52Q52LA3 116 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PLEKHO1Q53GL0 409 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 BOLA3Q53S33 107 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ASTLQ6HA08 431 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 TMEM53Q6P2H8 277 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 NFRKBQ6P4R8 1299 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ELMSAN1Q6PJG2 1045 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 IZUMO2Q6UXV1 221 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 RRAGAQ7L523 313 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 EXOC3L1Q86VI1 746 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TRIM69Q86WT6 500 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ERICH1Q86X53 443 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 DDX42Q86XP3 938 aaKnown RBP eCLIP2.34□□□□□ -2.04
USP53-202ENST00000450251 PLD3Q8IV08 490 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 AGAP11Q8TF27 550 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 CIDECQ96AQ7 238 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 MCRS1Q96EZ8 462 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 BTBD9Q96Q07 612 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 CGREF1Q99674 301 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 ARPC5LQ9BPX5 153 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 UQCC2Q9BRT2 126 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 BTBD10Q9BSF8 475 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 GCOM2Q9BZD3 368 aaPredicted RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 LRMDAQ9H2I8 198 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 DPH5Q9H2P9 285 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TRIM39Q9HCM9 518 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 GPCPD1Q9NPB8 672 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 PCMTD2Q9NV79 361 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TRMT6Q9UJA5 497 aaKnown RBP2.34□□□□□ -2.04
USP53-202ENST00000450251 TUBE1Q9UJT0 475 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TLK1Q9UKI8 766 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 RAB26Q9ULW5 256 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 STARD13Q9Y3M8 1113 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 SPHKAPQ2M3C7 1700 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MROH7Q68CQ1 1323 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ADGRA2Q96PE1 1338 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SETBP1Q9Y6X0 1596 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 NOTOA8MTQ0 251 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FAM25EA8MYX2 175 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms