RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RUBCNQ92622 972 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 TTYH3Q9C0H2 523 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 SLCO1B3Q9NPD5 702 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 PHF2O75151 1096 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 SAT1P21673 171 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 KCNA3P22001 575 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 FMO5P49326 533 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 NOP14P78316 857 aaKnown RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 HGSNATQ68CP4 663 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 SCYL2Q6P3W7 929 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 USP37Q86T82 979 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 ARHGAP24Q8N264 748 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 NT5C1BQ96P26 610 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 MKNK1Q9BUB5 465 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 ERVK-5Q9HDB9 667 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 HNRNPDLO14979 420 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 PDIA2Q13087 525 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 RCN1Q15293 331 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 CEP70Q8NHQ1 597 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ZNF577Q9BSK1 485 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 PI4K2AQ9BTU6 479 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 BCAS3Q9H6U6 928 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ZFATQ9P243 1243 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 RASSF9O75901 435 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 HAUS5O94927 633 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 INHBAP08476 426 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 MAN1A1P33908 653 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 RFC5P40937 340 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 RASA3Q14644 834 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 NFIXQ14938 502 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 FAM182AQ5T1J6 154 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 C4orf32Q8N8J7 132 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 TXNDC16Q9P2K2 825 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 MIF4GDA9UHW6 222 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ZBTB5O15062 677 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 SLC16A4O15374 487 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 NVLO15381 856 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 KRT19P08727 400 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 PYGMP11217 842 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ECM1Q16610 540 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 YTHDF3Q7Z739 585 aaKnown RBP13.23□□□□□ -0.29
UBE3B-204ENST00000449510 AGR3Q8TD06 166 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 FAM84AQ96KN4 292 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 C1orf112Q9NSG2 853 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 ANAPC4Q9UJX5 808 aa13.23□□□□□ -0.29
UBE3B-204ENST00000449510 CAPN9O14815 690 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 PJA2O43164 708 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 KRT1P04264 644 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 PSMC4P43686 418 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 MFAP3P55082 362 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 DDR1Q08345 913 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 PDIA5Q14554 519 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 C1orf146Q5VVC0 180 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 CFAP57Q96MR6 1250 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-204ENST00000449510 SNX3O60493 162 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 ZBED4O75132 1171 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 TOM1L1O75674 476 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 DCTN3O75935 186 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 P3H1Q32P28 736 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 SPATA24Q86W54 205 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 NAP1L4Q99733 375 aaKnown RBP13.22□□□□□ -0.29
UBE3B-204ENST00000449510 PCDHB4Q9Y5E5 795 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 CFLARO15519 480 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 HSPA6P17066 643 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-204ENST00000449510 MTDHQ86UE4 582 aaKnown RBP13.22□□□□□ -0.29
UBE3B-204ENST00000449510 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-204ENST00000449510 LRRC15Q8TF66 581 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 CCT6BQ92526 530 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 ALG3Q92685 438 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 EIF2AK1Q9BQI3 630 aaKnown RBP13.22□□□□□ -0.29
UBE3B-204ENST00000449510 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 VCX3BQ9H321 246 aa13.22□□□□□ -0.29
UBE3B-204ENST00000449510 PALM3A6NDB9 673 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-204ENST00000449510 ARFIP2P53365 341 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 TMPRSS15P98073 1019 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms