RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 WDR81Q562E7 1941 aa13□□□□□ -0.33
RCL1-208ENST00000448872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.99□□□□□ -0.33
RCL1-208ENST00000448872 SYCE3A1L190 88 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 PIGRP01833 764 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 HARSP12081 509 aaKnown RBP12.99□□□□□ -0.33
RCL1-208ENST00000448872 ADSSP30520 456 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 LIG4P49917 911 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 PMS1P54277 932 aaKnown RBP12.99□□□□□ -0.33
RCL1-208ENST00000448872 ALCAMQ13740 583 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
RCL1-208ENST00000448872 SEZ6Q53EL9 994 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 CNKSR3Q6P9H4 555 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
RCL1-208ENST00000448872 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
RCL1-208ENST00000448872 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 ZSWIM2Q8NEG5 633 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 HVCN1Q96D96 273 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.99□□□□□ -0.332e-8■■□□□ 11.6
RCL1-208ENST00000448872 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 TNFSF13BQ9Y275 285 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 ALPK3Q96L96 1907 aa12.99□□□□□ -0.33
RCL1-208ENST00000448872 ENPP3O14638 875 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 CLIC2O15247 247 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 NPTXRO95502 500 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 SCP2P22307 547 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 PROZP22891 400 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 NLRP12P59046 1061 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 MLLT1Q03111 559 aaPredicted RBP12.98□□□□□ -0.33
RCL1-208ENST00000448872 NCBP1Q09161 790 aaKnown RBP12.98□□□□□ -0.33
RCL1-208ENST00000448872 PCBP1Q15365 356 aaKnown RBP eCLIP12.98□□□□□ -0.33
RCL1-208ENST00000448872 ZNF568Q3ZCX4 644 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 TMEM240Q5SV17 173 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 ZBTB41Q5SVQ8 909 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 TWF2Q6IBS0 349 aaKnown RBP12.98□□□□□ -0.33
RCL1-208ENST00000448872 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 NOTUMQ6P988 496 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 TMCO2Q7Z6W1 182 aaPredicted RBP12.98□□□□□ -0.33
RCL1-208ENST00000448872 GUF1Q8N442 669 aaKnown RBP12.98□□□□□ -0.33
RCL1-208ENST00000448872 CEP120Q8N960 986 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 APBB2Q92870 758 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 TCHPQ9BT92 498 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 CDT1Q9H211 546 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 PCIF1Q9H4Z3 704 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 CXXC1Q9P0U4 656 aaPredicted RBP12.98□□□□□ -0.33
RCL1-208ENST00000448872 EXOC7Q9UPT5 735 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 HES2Q9Y543 173 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 UBE4BO95155 1302 aa12.98□□□□□ -0.33
RCL1-208ENST00000448872 TRIM49BA6NDI0 452 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 TOM1L1O75674 476 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 FGBP02675 491 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 PFKMP08237 780 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 ZSCAN20P17040 1043 aaPredicted RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 AXLP30530 894 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
RCL1-208ENST00000448872 STX17P56962 302 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 TYRO3Q06418 890 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 IKBKEQ14164 716 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 COBLL1Q53SF7 1204 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 C9orf50Q5SZB4 431 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 MPZL3Q6UWV2 235 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 MED15Q96RN5 788 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 GBP3Q9H0R5 595 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 RGS18Q9NS28 235 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 CTNND2Q9UQB3 1225 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 PCDHB2Q9Y5E7 798 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 TRIP12Q14669 1992 aaPredicted RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 C9IYK1 514 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 N4BP3O15049 544 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 CLDN3O15551 220 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 ATF7P17544 494 aaPredicted RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 ABCD1P33897 745 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 OSTNP61366 133 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 DEFB103AP81534 67 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 MCL1Q07820 350 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 C11orf57Q6ZUT1 292 aaPredicted RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 RNF169Q8NCN4 708 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
RCL1-208ENST00000448872 NELFBQ8WX92 580 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 LPPQ93052 612 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 SAAL1Q96ER3 474 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 EEF2KMTQ96G04 330 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 GDF15Q99988 308 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 APOL6Q9BWW8 343 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 FTHL17Q9BXU8 183 aa12.97□□□□□ -0.33
RCL1-208ENST00000448872 NXF3Q9H4D5 531 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms