RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 TMEM175Q9BSA9 504 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 APOL6Q9BWW8 343 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 C2orf40Q9H1Z8 148 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 PRMT7Q9NVM4 692 aaPredicted RBP21.81■■□□□ 1.08
VCP-203ENST00000448530 FAN1Q9Y2M0 1017 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 PCDHB6Q9Y5E3 794 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 GPR37L1O60883 481 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 HOXB8P17481 243 aaPredicted RBP21.8■■□□□ 1.08
VCP-203ENST00000448530 TOB1P50616 345 aaPredicted RBP21.8■■□□□ 1.08
VCP-203ENST00000448530 PPP2R5AQ15172 486 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 SNX29Q8TEQ0 813 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 PRIMPOLQ96LW4 560 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 LRFN3Q9BTN0 628 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 ZBP1Q9H171 429 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 KIAA1024Q9UPX6 916 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 HES2Q9Y543 173 aa21.8■■□□□ 1.08
VCP-203ENST00000448530 TDRD15B5MCY1 1934 aaKnown RBP21.79■■□□□ 1.08
VCP-203ENST00000448530 FAM86C2PA6NEL3 165 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 ARL5CA6NH57 179 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 B4GALT5O43286 388 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 NR1I2O75469 434 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 DDHD2O94830 711 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 NPTXRO95502 500 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 CTSAP10619 480 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 GJB2P29033 226 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 MLH1P40692 756 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 AFF1P51825 1210 aaKnown RBP21.79■■□□□ 1.08
VCP-203ENST00000448530 KCNC3Q14003 757 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 TPRNQ4KMQ1 711 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 KRT79Q5XKE5 535 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 DTHD1Q6ZMT9 781 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 DEPTORQ8TB45 409 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 IFT74Q96LB3 600 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 GAD1Q99259 594 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 PHF7Q9BWX1 381 aaPredicted RBP21.79■■□□□ 1.08
VCP-203ENST00000448530 BHMT2Q9H2M3 363 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 GIT1Q9Y2X7 761 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 C5orf42Q9H799 3197 aa21.79■■□□□ 1.08
VCP-203ENST00000448530 CLASP2O75122 1294 aaKnown RBP21.78■■□□□ 1.08
VCP-203ENST00000448530 PRPHP41219 470 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 NAMPTP43490 491 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 OR1G1P47890 313 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 MAPK6Q16659 721 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 RILPL1Q5EBL4 403 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 CDCA2Q69YH5 1023 aaPredicted RBP21.78■■□□□ 1.08
VCP-203ENST00000448530 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 CDR2LQ86X02 465 aaPredicted RBP21.78■■□□□ 1.08
VCP-203ENST00000448530 IGSF22Q8N9C0 903 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 BCL7CQ8WUZ0 217 aaPredicted RBP21.78■■□□□ 1.08
VCP-203ENST00000448530 AUTS2Q8WXX7 1259 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 APOL5Q9BWW9 433 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 RNF39Q9H2S5 420 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 NXF3Q9H4D5 531 aaKnown RBP21.78■■□□□ 1.08
VCP-203ENST00000448530 DDX19AQ9NUU7 478 aaKnown RBP21.78■■□□□ 1.08
VCP-203ENST00000448530 SMC3Q9UQE7 1217 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 HCFC2Q9Y5Z7 792 aa21.78■■□□□ 1.08
VCP-203ENST00000448530 A0A1B0GUA9 196 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 NRP1O14786 923 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 B4GALT3O60512 393 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 LIG1P18858 919 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 CES5AQ6NT32 575 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 RNF135Q8IUD6 432 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 KIFAP3Q92845 792 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 TBC1D32Q96NH3 1257 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 PARP2Q9UGN5 583 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 DNM3Q9UQ16 869 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 PRG3Q9Y2Y8 225 aaPredicted RBP21.77■■□□□ 1.08
VCP-203ENST00000448530 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.77■■□□□ 1.08
VCP-203ENST00000448530 IRAK3Q9Y616 596 aa21.77■■□□□ 1.08
VCP-203ENST00000448530 N4BP3O15049 544 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 INPPL1O15357 1258 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 CD2BP2O95400 341 aaKnown RBP21.76■■□□□ 1.07
VCP-203ENST00000448530 SSBP05455 408 aaKnown RBP eCLIP21.76■■□□□ 1.07
VCP-203ENST00000448530 SCNN1GP51170 649 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 PRPF4BQ13523 1007 aaKnown RBP21.76■■□□□ 1.07
VCP-203ENST00000448530 CBX2Q14781 532 aaPredicted RBP21.76■■□□□ 1.07
VCP-203ENST00000448530 ECM1Q16610 540 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 FAM187BQ17R55 369 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 SYCE2Q6PIF2 218 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 PPFIBP1Q86W92 1011 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 SUSD6Q92537 303 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 RPGRIP1Q96KN7 1286 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 ZFP42Q96MM3 310 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 RPS6KC1Q96S38 1066 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 EMILIN2Q9BXX0 1053 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 FZD8Q9H461 694 aa21.76■■□□□ 1.07
VCP-203ENST00000448530 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.76■■□□□ 1.07
VCP-203ENST00000448530 PRKCBP05771 671 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 AKAP5P24588 427 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 EFNA5P52803 228 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 COLGALT2Q8IYK4 626 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 BSNDQ8WZ55 320 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 ADPGKQ9BRR6 497 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 S1PR5Q9H228 398 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 C11orf16Q9NQ32 467 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 MRPL17Q9NRX2 175 aaKnown RBP21.75■■□□□ 1.07
VCP-203ENST00000448530 DZANK1Q9NVP4 752 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 HCN4Q9Y3Q4 1203 aa21.75■■□□□ 1.07
VCP-203ENST00000448530 SPDYE4A6NLX3 237 aa21.74■■□□□ 1.07
VCP-203ENST00000448530 PRR33A8MZF0 331 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms