RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CNNM3Q8NE01 707 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 PRSS33Q8NF86 280 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 MTMR9Q96QG7 549 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 PRG3Q9Y2Y8 225 aaPredicted RBP31.46■■■□□ 2.63
CBX4-202ENST00000448310 DENND4AQ7Z401 1863 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 C2orf16Q68DN1 1984 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 ATP2B1P20020 1258 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 AXLP30530 894 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 ARL2P36404 184 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 MLH1P40692 756 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 RARRES1P49788 294 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 KIAA1841Q6NSI8 718 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 NOTUMQ6P988 496 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 TMC5Q6UXY8 1006 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 CABP7Q86V35 215 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 KREMEN2Q8NCW0 462 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 KLHL5Q96PQ7 755 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 GAD1Q99259 594 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 APOL6Q9BWW8 343 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 TMEM60Q9H2L4 133 aa31.45■■■□□ 2.63
CBX4-202ENST00000448310 GLRA2P23416 452 aa31.44■■■□□ 2.62
CBX4-202ENST00000448310 GUCY1B3Q02153 619 aa31.44■■■□□ 2.62
CBX4-202ENST00000448310 AMHR2Q16671 573 aa31.44■■■□□ 2.62
CBX4-202ENST00000448310 IFNLR1Q8IU57 520 aaPredicted RBP31.44■■■□□ 2.62
CBX4-202ENST00000448310 CSRNP2Q9H175 543 aa31.44■■■□□ 2.62
CBX4-202ENST00000448310 POLR3FQ9H1D9 316 aaPredicted RBP31.44■■■□□ 2.62
CBX4-202ENST00000448310 MARCH5Q9NX47 278 aa31.44■■■□□ 2.62
CBX4-202ENST00000448310 PLXNA3P51805 1871 aa31.44■■■□□ 2.62
CBX4-202ENST00000448310 ARL5CA6NH57 179 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 USO1O60763 962 aaKnown RBP31.43■■■□□ 2.62
CBX4-202ENST00000448310 SEC24BO95487 1268 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 CNPP09543 421 aaKnown RBP31.43■■■□□ 2.62
CBX4-202ENST00000448310 ARF4P18085 180 aaPredicted RBP31.43■■■□□ 2.62
CBX4-202ENST00000448310 KLRC2P26717 231 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 OR1G1P47890 313 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 MRE11P49959 708 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 PCBP1Q15365 356 aaKnown RBP eCLIP31.43■■■□□ 2.62
CBX4-202ENST00000448310 ATAT1Q5SQI0 421 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 CDR2LQ86X02 465 aaPredicted RBP31.43■■■□□ 2.62
CBX4-202ENST00000448310 COLGALT2Q8IYK4 626 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 CCDC51Q96ER9 411 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 ZFP42Q96MM3 310 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 EMILIN2Q9BXX0 1053 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 UBN1Q9NPG3 1134 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 MIOSQ9NXC5 875 aa31.43■■■□□ 2.62
CBX4-202ENST00000448310 DBR1Q9UK59 544 aaKnown RBP31.43■■■□□ 2.62
CBX4-202ENST00000448310 C2CD2LO14523 706 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 B4GALT5O43286 388 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 MCM7P33993 719 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 SCNN1GP51170 649 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 VCPP55072 806 aaKnown RBP31.42■■■□□ 2.62
CBX4-202ENST00000448310 POU5F1BQ06416 359 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 NCBP1Q09161 790 aaKnown RBP31.42■■■□□ 2.62
CBX4-202ENST00000448310 MAEAQ7L5Y9 396 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 PPFIBP1Q86W92 1011 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 SMOC2Q9H3U7 446 aa31.42■■■□□ 2.62
CBX4-202ENST00000448310 NXF3Q9H4D5 531 aaKnown RBP31.42■■■□□ 2.62
CBX4-202ENST00000448310 SPDYE4A6NLX3 237 aa31.41■■■□□ 2.62
CBX4-202ENST00000448310 LILRB3O75022 631 aa31.41■■■□□ 2.62
CBX4-202ENST00000448310 PDGFBP01127 241 aaPredicted RBP31.41■■■□□ 2.62
CBX4-202ENST00000448310 CLCN4P51793 760 aa31.41■■■□□ 2.62
CBX4-202ENST00000448310 TAS1R1Q7RTX1 841 aa31.41■■■□□ 2.62
CBX4-202ENST00000448310 GPRC5CQ9NQ84 441 aa31.41■■■□□ 2.62
CBX4-202ENST00000448310 MRPL17Q9NRX2 175 aaKnown RBP31.41■■■□□ 2.62
CBX4-202ENST00000448310 F8W810 466 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 INPPL1O15357 1258 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 SOD2P04179 222 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 ASGR2P07307 311 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 SPATA31C1P0DKV0 1188 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 TDRD5Q8NAT2 981 aaKnown RBP31.4■■■□□ 2.62
CBX4-202ENST00000448310 HERC2P3Q9BVR0 1158 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 TRIM6Q9C030 488 aaPredicted RBP31.4■■■□□ 2.62
CBX4-202ENST00000448310 SFXN1Q9H9B4 322 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 STK39Q9UEW8 545 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 SORCS3Q9UPU3 1222 aa31.4■■■□□ 2.62
CBX4-202ENST00000448310 BRD1O95696 1058 aa31.39■■■□□ 2.62
CBX4-202ENST00000448310 URODP06132 367 aa31.39■■■□□ 2.62
CBX4-202ENST00000448310 DSC1Q08554 894 aa31.39■■■□□ 2.62
CBX4-202ENST00000448310 MTMR3Q13615 1198 aa31.39■■■□□ 2.62
CBX4-202ENST00000448310 PHOX2BQ99453 314 aa31.39■■■□□ 2.62
CBX4-202ENST00000448310 MED24O75448 989 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 NPTXRO95502 500 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 AKAP5P24588 427 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 CATSPER3Q86XQ3 398 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 CCDC83Q8IWF9 413 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 NFKBIZQ9BYH8 718 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 LIMD1Q9UGP4 676 aa31.38■■■□□ 2.61
CBX4-202ENST00000448310 LRRIQ4A6NIV6 560 aa31.37■■■□□ 2.61
CBX4-202ENST00000448310 SAFBQ15424 915 aaKnown RBP eCLIP31.37■■■□□ 2.61
CBX4-202ENST00000448310 GPR149Q86SP6 731 aa31.37■■■□□ 2.61
CBX4-202ENST00000448310 GIT1Q9Y2X7 761 aa31.37■■■□□ 2.61
CBX4-202ENST00000448310 XRCC6P12956 609 aaKnown RBP eCLIP31.36■■■□□ 2.615e-8■□□□□ 10.6
CBX4-202ENST00000448310 TCF15Q12870 199 aa31.36■■■□□ 2.61
CBX4-202ENST00000448310 ZDHHC14Q8IZN3 488 aa31.36■■■□□ 2.61
CBX4-202ENST00000448310 RPS6KC1Q96S38 1066 aa31.36■■■□□ 2.61
CBX4-202ENST00000448310 TUFT1Q9NNX1 390 aa31.36■■■□□ 2.61
CBX4-202ENST00000448310 KLK14Q9P0G3 267 aa31.36■■■□□ 2.61
CBX4-202ENST00000448310 TEX28O15482 410 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 MYBP10242 640 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 AVPR2P30518 371 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms