RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 MAFAQ8NHW3 353 aaPredicted RBP12.72□□□□□ -0.37
LINC00408-201ENST00000447784 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
LINC00408-201ENST00000447784 HPS3Q969F9 1004 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 HVCN1Q96D96 273 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 ACCSQ96QU6 501 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
LINC00408-201ENST00000447784 FZD8Q9H461 694 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 TMEM206Q9H813 350 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 MINDY3Q9H8M7 445 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 SLC39A2Q9NP94 309 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 CHST12Q9NRB3 414 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 TBX20Q9UMR3 447 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 PIN4Q9Y237 131 aaKnown RBP12.72□□□□□ -0.37
LINC00408-201ENST00000447784 SCN5AQ14524 2016 aa12.72□□□□□ -0.37
LINC00408-201ENST00000447784 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 KLRC4O43908 158 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 LETM1O95202 739 aaPredicted RBP12.71□□□□□ -0.37
LINC00408-201ENST00000447784 LIG4P49917 911 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 GTF2BQ00403 316 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 STIM1Q13586 685 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 ZC2HC1CQ53FD0 456 aaPredicted RBP12.71□□□□□ -0.37
LINC00408-201ENST00000447784 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
LINC00408-201ENST00000447784 NOTUMQ6P988 496 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 TMCO2Q7Z6W1 182 aaPredicted RBP12.71□□□□□ -0.37
LINC00408-201ENST00000447784 FAM228AQ86W67 206 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
LINC00408-201ENST00000447784 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
LINC00408-201ENST00000447784 LCHNA4D1U4 455 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 BIN1O00499 593 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ENPP3O14638 875 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 HNRNPDLO14979 420 aaKnown RBP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 TSPAN1O60635 241 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ARHGEF15O94989 841 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 MYBP10242 640 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 MATR3P43243 847 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 SARSP49591 514 aaKnown RBP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 STK4Q13043 487 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ADGRE1Q14246 886 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 FAM187BQ17R55 369 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ZNF658Q5TYW1 1059 aaPredicted RBP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ZPBP2Q6X784 338 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 SPATA20Q8TB22 786 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 CCDC51Q96ER9 411 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 ADPGKQ9BRR6 497 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
LINC00408-201ENST00000447784 CCDC113Q9H0I3 377 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 AGPAT5Q9NUQ2 364 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 MAN1B1Q9UKM7 699 aa12.7□□□□□ -0.38
LINC00408-201ENST00000447784 UBE4BO95155 1302 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 CNTNAP2Q9UHC6 1331 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 N4BP3O15049 544 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 B4GALT5O43286 388 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
LINC00408-201ENST00000447784 SKIP12755 728 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
LINC00408-201ENST00000447784 PPP1R2P41236 205 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 ERVK-21P61565 698 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 EHHADHQ08426 723 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 SLFN12LQ6IEE8 588 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 FAM117BQ6P1L5 589 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 HS2ST1Q7LGA3 356 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 MAP4K3Q8IVH8 894 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 NELFCDQ8IXH7 590 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 TET1Q8NFU7 2136 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 KCNN1Q92952 543 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 SAMD11Q96NU1 681 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 TGS1Q96RS0 853 aaKnown RBP12.69□□□□□ -0.38
LINC00408-201ENST00000447784 FIZ1Q96SL8 496 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 YME1L1Q96TA2 773 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 ADAM2Q99965 735 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 TARS2Q9BW92 718 aaKnown RBP12.69□□□□□ -0.38
LINC00408-201ENST00000447784 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
LINC00408-201ENST00000447784 C1orf112Q9NSG2 853 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 TNFSF13BQ9Y275 285 aa12.69□□□□□ -0.38
LINC00408-201ENST00000447784 TRIP12Q14669 1992 aaPredicted RBP12.69□□□□□ -0.38
LINC00408-201ENST00000447784 COL6A3P12111 3177 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 CLDN3O15551 220 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 TOM1L1O75674 476 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 IBSPP21815 317 aaPredicted RBP12.68□□□□□ -0.38
LINC00408-201ENST00000447784 RAB27AP51159 221 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 CASP5P51878 434 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 AMHR2Q16671 573 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 KNOP1Q1ED39 458 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms