RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 PLEKHO2Q8TD55 490 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 ACER1Q8TDN7 264 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 POP1Q99575 1024 aaKnown RBP17.61■□□□□ 0.41
PBX3-207ENST00000447726 KDM4CQ9H3R0 1056 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 INTS9Q9NV88 658 aaKnown RBP17.61■□□□□ 0.41
PBX3-207ENST00000447726 CCT8L1PA6NM43 557 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 POLR2MP0CAP2 368 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 CHRNB2P17787 502 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 IFNAR2P48551 515 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 NOP9Q86U38 636 aaKnown RBP17.61■□□□□ 0.41
PBX3-207ENST00000447726 CCDC105Q8IYK2 499 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 SH2D3AQ9BRG2 576 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 CCDC113Q9H0I3 377 aa17.61■□□□□ 0.41
PBX3-207ENST00000447726 TPX2Q9ULW0 747 aaKnown RBP17.61■□□□□ 0.41
PBX3-207ENST00000447726 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 PODXLO00592 558 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 RIPK2O43353 540 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 RFX1P22670 979 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 SNCBQ16143 134 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 EPC2Q52LR7 807 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 SEL1L2Q5TEA6 688 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 PODNQ7Z5L7 613 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 EPS8L1Q8TE68 723 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 ELAC2Q9BQ52 826 aaKnown RBP17.6■□□□□ 0.41
PBX3-207ENST00000447726 MTRF1LQ9UGC7 380 aaKnown RBP17.6■□□□□ 0.41
PBX3-207ENST00000447726 RARAP10276 462 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 RDXP35241 583 aaKnown RBP17.6■□□□□ 0.41
PBX3-207ENST00000447726 XRCC4Q13426 336 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 CLUL1Q15846 466 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 TBC1D10BQ4KMP7 808 aaPredicted RBP17.6■□□□□ 0.41
PBX3-207ENST00000447726 C6orf118Q5T5N4 469 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 PADI6Q6TGC4 694 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
PBX3-207ENST00000447726 PIGWQ7Z7B1 504 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 CCDC25Q86WR0 208 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 CD101Q93033 1021 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 RPS6KC1Q96S38 1066 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 CNOT7Q9UIV1 285 aaKnown RBP17.6■□□□□ 0.41
PBX3-207ENST00000447726 PFASO15067 1338 aa17.6■□□□□ 0.41
PBX3-207ENST00000447726 CYP26A1O43174 497 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 RTN2O75298 545 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 AGTP01019 485 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 ALAS1P13196 640 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 HSPA6P17066 643 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 COILP38432 576 aaPredicted RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 ADCY2Q08462 1091 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 DACT2Q5SW24 774 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 SLC47A2Q86VL8 602 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 SCLT1Q96NL6 688 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 KCND2Q9NZV8 630 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 VIMP08670 466 aaKnown RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 AUHQ13825 339 aaKnown RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 SIX1Q15475 284 aaPredicted RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 CEP57Q86XR8 500 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 SLC13A5Q86YT5 568 aaPredicted RBP17.59■□□□□ 0.41
PBX3-207ENST00000447726 WDR11Q9BZH6 1224 aa17.59■□□□□ 0.41
PBX3-207ENST00000447726 RASGRF2O14827 1237 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 SPOPO43791 374 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 GHRP10912 638 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 NPR1P16066 1061 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 B3GNT9Q6UX72 402 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 NSMFQ6X4W1 530 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 TRMT1LQ7Z2T5 733 aaKnown RBP17.58■□□□□ 0.41
PBX3-207ENST00000447726 ELMO3Q96BJ8 720 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 KREMEN1Q96MU8 473 aa17.58■□□□□ 0.41
PBX3-207ENST00000447726 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.41
PBX3-207ENST00000447726 NOCTQ9UK39 431 aaKnown RBP17.58■□□□□ 0.41
PBX3-207ENST00000447726 ASAP2O43150 1006 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 VIL1P09327 827 aaKnown RBP17.58■□□□□ 0.4
PBX3-207ENST00000447726 RARGP13631 454 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 CETN1Q12798 172 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 TCEAL1Q15170 157 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 ANKS4BQ8N8V4 417 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 P3H4Q92791 437 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 ART4Q93070 314 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 CSRNP1Q96S65 589 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 DDX23Q9BUQ8 820 aaKnown RBP17.58■□□□□ 0.4
PBX3-207ENST00000447726 NUP85Q9BW27 656 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 TEKT3Q9BXF9 490 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 TMEM117Q9H0C3 514 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
PBX3-207ENST00000447726 GOLGA8IPA6NC78 632 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 GOLGA8JA6NMD2 632 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 DNAJC8O75937 253 aaPredicted RBP17.57■□□□□ 0.4
PBX3-207ENST00000447726 MYH11P35749 1972 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 CYP1B1Q16678 543 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 PREPLQ4J6C6 727 aaPredicted RBP17.57■□□□□ 0.4
PBX3-207ENST00000447726 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 ZNF564Q8TBZ8 553 aaPredicted RBP17.57■□□□□ 0.4
PBX3-207ENST00000447726 HSPBP1Q9NZL4 362 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 PARP2Q9UGN5 583 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 LRRC14Q15048 493 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 LONRF1Q17RB8 773 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 TNFAIP8L3Q5GJ75 292 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 STRIP1Q5VSL9 837 aa17.57■□□□□ 0.4
PBX3-207ENST00000447726 OTUD6AQ7L8S5 288 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms