RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PWWP2AQ96N64 755 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.18■□□□□ 0.344e-6■■■■□ 20.4
CNOT3-204ENST00000447684 COL4A1P02462 1669 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 RASA1P20936 1047 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 IL9RQ01113 521 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 RCN1Q15293 331 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 EPHA7Q15375 998 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 KHDC1Q4VXA5 237 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 RBM26Q5T8P6 1007 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 IRGCQ6NXR0 463 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 RFWD3Q6PCD5 774 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 MAIP1Q8WWC4 291 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 STOML1Q9UBI4 398 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 LRRN2O75325 713 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 PYGBP11216 843 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 SKIP12755 728 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 SNX30Q5VWJ9 437 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 TRMT10CQ7L0Y3 403 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 ART4Q93070 314 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 DDX50Q9BQ39 737 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 SIX2Q9NPC8 291 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 TTLL1O95922 423 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 UBTFL6P0CB48 400 aaPredicted RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 VHLP40337 213 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 PDIA5Q14554 519 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 DRAP1Q14919 205 aaPredicted RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 TMED2Q15363 201 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 UBE2SQ16763 222 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 EPM2AIP1Q7L775 607 aaPredicted RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 SCG3Q8WXD2 468 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 ZNF333Q96JL9 665 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 UBE2OQ9C0C9 1292 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 DCLRE1BQ9H816 532 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 SAP30BPQ9UHR5 308 aaKnown RBP17.17■□□□□ 0.34
CNOT3-204ENST00000447684 PHTF1Q9UMS5 762 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 NENFQ9UMX5 172 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 USH1CQ9Y6N9 552 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 LAMB2P55268 1798 aa17.17■□□□□ 0.34
CNOT3-204ENST00000447684 COILP38432 576 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 NT5C2P49902 561 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 ERFP50548 548 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 JAM2P57087 298 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 CCDC15Q0P6D6 951 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 PRUNE1Q86TP1 453 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 APLFQ8IW19 511 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 SLC7A6OSQ96CW6 309 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 PCYOX1Q9UHG3 505 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 MTUS1Q9ULD2 1270 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 LRCH1Q9Y2L9 728 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 PCDHA2Q9Y5H9 948 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 FAM196BA6NMK8 535 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 RASA4BC9J798 803 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 RASA4O43374 803 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 ECEL1O95672 775 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 ZCCHC18P0CG32 403 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 SOX5P35711 763 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 RASSF2P50749 326 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 EDRF1Q3B7T1 1238 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 ZC2HC1CQ53FD0 456 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 TAF1BQ53T94 588 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 TRIM74Q86UV6 250 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 TRIM73Q86UV7 250 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 ENDOVQ8N8Q3 282 aaKnown RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 C1orf54Q8WWF1 131 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 GRAMD1AQ96CP6 724 aa17.16■□□□□ 0.34
CNOT3-204ENST00000447684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
CNOT3-204ENST00000447684 FRMPD2Q68DX3 1309 aaPredicted RBP17.15■□□□□ 0.34
CNOT3-204ENST00000447684 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 TOM1O60784 492 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 DLATP10515 647 aaKnown RBP17.15■□□□□ 0.34
CNOT3-204ENST00000447684 PYGMP11217 842 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 WASHC2DQ5SRD0 308 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 FBXO41Q8TF61 875 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 MRRFQ96E11 262 aaKnown RBP17.15■□□□□ 0.34
CNOT3-204ENST00000447684 ADAM33Q9BZ11 813 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 DNAJC12Q9UKB3 198 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 NCANO14594 1321 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 ATP8B3O60423 1300 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 KRT36O76013 467 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 CETPP11597 493 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 KLRK1P26718 216 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 MARK3P27448 753 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 ADCY7P51828 1080 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 ACVR2BQ13705 512 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 FAM136AQ96C01 138 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 NAALADL1Q9UQQ1 740 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 PCDHA3Q9Y5H8 950 aa17.15■□□□□ 0.34
CNOT3-204ENST00000447684 DCCP43146 1447 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms