RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 IMPACTQ9P2X3 320 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 KCNN1Q92952 543 aa27.15■■□□□ 1.94
RFFL-206ENST00000447669 VTI1AQ96AJ9 217 aa27.15■■□□□ 1.94
RFFL-206ENST00000447669 FAM84AQ96KN4 292 aa27.15■■□□□ 1.94
RFFL-206ENST00000447669 C2orf40Q9H1Z8 148 aa27.15■■□□□ 1.94
RFFL-206ENST00000447669 FZD8Q9H461 694 aa27.15■■□□□ 1.94
RFFL-206ENST00000447669 GYPCP04921 128 aa27.14■■□□□ 1.94
RFFL-206ENST00000447669 ACOT2P49753 483 aa27.14■■□□□ 1.94
RFFL-206ENST00000447669 KCNMA1Q12791 1236 aa27.14■■□□□ 1.94
RFFL-206ENST00000447669 SNRNP35Q16560 246 aaKnown RBP27.14■■□□□ 1.94
RFFL-206ENST00000447669 FKBP15Q5T1M5 1219 aa27.14■■□□□ 1.94
RFFL-206ENST00000447669 PCMTD1Q96MG8 357 aaPredicted RBP27.14■■□□□ 1.94
RFFL-206ENST00000447669 ACO2Q99798 780 aaKnown RBP27.14■■□□□ 1.94
RFFL-206ENST00000447669 MKNK1Q9BUB5 465 aa27.14■■□□□ 1.94
RFFL-206ENST00000447669 ADAMTS10Q9H324 1103 aa27.14■■□□□ 1.94
RFFL-206ENST00000447669 METTL14Q9HCE5 456 aaKnown RBP27.14■■□□□ 1.94
RFFL-206ENST00000447669 SMIM35A0A1B0GVV1 85 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 GPR32O75388 356 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 PIGRP01833 764 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 CST5P28325 142 aaPredicted RBP27.14■■□□□ 1.93
RFFL-206ENST00000447669 HOXC8P31273 242 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 PHKA2P46019 1235 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 SNRPFP62306 86 aaKnown RBP27.14■■□□□ 1.93
RFFL-206ENST00000447669 MYBPC2Q14324 1141 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 RNF180Q86T96 592 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 WNT8BQ93098 351 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 CPB2Q96IY4 423 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 MRPL4Q9BYD3 311 aaKnown RBP27.14■■□□□ 1.93
RFFL-206ENST00000447669 GTF2IRD1Q9UHL9 959 aa27.14■■□□□ 1.93
RFFL-206ENST00000447669 FRMPD3Q5JV73 1810 aa27.13■■□□□ 1.93
RFFL-206ENST00000447669 EPHB6O15197 1021 aa27.13■■□□□ 1.93
RFFL-206ENST00000447669 CASP14P31944 242 aa27.13■■□□□ 1.93
RFFL-206ENST00000447669 FXR1P51114 621 aaKnown RBP eCLIP27.13■■□□□ 1.93
RFFL-206ENST00000447669 LRRC8AQ8IWT6 810 aa27.13■■□□□ 1.93
RFFL-206ENST00000447669 POP1Q99575 1024 aaKnown RBP27.13■■□□□ 1.93
RFFL-206ENST00000447669 OSMRQ99650 979 aa27.13■■□□□ 1.93
RFFL-206ENST00000447669 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.13■■□□□ 1.93
RFFL-206ENST00000447669 GARTP22102 1010 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 ACLYP53396 1101 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 WNT7BP56706 349 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 BFSP1Q12934 665 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 EEF1DP3Q658K8 133 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 TMEM174Q8WUU8 243 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 CCDC127Q96BQ5 260 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 TCHPQ9BT92 498 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 AGO2Q9UKV8 859 aaKnown RBP27.12■■□□□ 1.93
RFFL-206ENST00000447669 SIK3Q9Y2K2 1263 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 STYXL1Q9Y6J8 313 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 ACKR2O00590 384 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 ABCD1P33897 745 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 PRPF4BQ13523 1007 aaKnown RBP27.12■■□□□ 1.93
RFFL-206ENST00000447669 AMHR2Q16671 573 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 GPD1LQ8N335 351 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 ERGIC2Q96RQ1 377 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 MSTO1Q9BUK6 570 aa27.12■■□□□ 1.93
RFFL-206ENST00000447669 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.12■■□□□ 1.937e-8■■■■■ 32.9
RFFL-206ENST00000447669 FAM207AQ9NSI2 230 aaPredicted RBP27.12■■□□□ 1.93
RFFL-206ENST00000447669 A0A1W2PQC6 194 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 AFPP02771 609 aaKnown RBP27.11■■□□□ 1.93
RFFL-206ENST00000447669 TMEM132AQ24JP5 1023 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 CBWD6Q4V339 395 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 CBWD3Q5JTY5 395 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 CBWD5Q5RIA9 395 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 C1orf220Q5T0J3 134 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 CRELD2Q6UXH1 353 aaPredicted RBP27.11■■□□□ 1.93
RFFL-206ENST00000447669 PCSK9Q8NBP7 692 aaKnown RBP27.11■■□□□ 1.93
RFFL-206ENST00000447669 ITIH6Q6UXX5 1313 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 A0A0B4J269 797 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 TC2NQ8N9U0 490 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 TMEM40Q8WWA1 233 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 FBXL18Q96ME1 805 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 NFKBIZQ9BYH8 718 aa27.11■■□□□ 1.93
RFFL-206ENST00000447669 ABLIM1O14639 778 aa27.1■■□□□ 1.93
RFFL-206ENST00000447669 CLDN3O15551 220 aa27.1■■□□□ 1.93
RFFL-206ENST00000447669 TNFSF9P41273 254 aa27.1■■□□□ 1.93
RFFL-206ENST00000447669 VAMP7P51809 220 aa27.1■■□□□ 1.93
RFFL-206ENST00000447669 SLC9C1Q4G0N8 1177 aa27.1■■□□□ 1.93
RFFL-206ENST00000447669 MKI67P46013 3256 aaKnown RBP27.1■■□□□ 1.93
RFFL-206ENST00000447669 TTC26A0AVF1 554 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 GNAT1P11488 350 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 POU5F1BQ06416 359 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 PPP3CAQ08209 521 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 ATF7IP2Q5U623 682 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 ZPBP2Q6X784 338 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 PPFIBP1Q86W92 1011 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 GPIHBP1Q8IV16 184 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 TOPORSQ9NS56 1045 aaPredicted RBP27.09■■□□□ 1.93
RFFL-206ENST00000447669 AGPAT5Q9NUQ2 364 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 LRRN2O75325 713 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 TOM1L1O75674 476 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 ACTN1P12814 892 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 KRT13P13646 458 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 SLC9A1P19634 815 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 SCP2P22307 547 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 ITGA7Q13683 1181 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 INTS8Q75QN2 995 aaKnown RBP27.09■■□□□ 1.93
RFFL-206ENST00000447669 IFNLR1Q8IU57 520 aaPredicted RBP27.09■■□□□ 1.93
RFFL-206ENST00000447669 CEP120Q8N960 986 aa27.09■■□□□ 1.93
RFFL-206ENST00000447669 EXTL3O43909 919 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 ARF4P18085 180 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms