RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 CCDC51Q96ER9 411 aa15.58■□□□□ 0.08
SREBF1-207ENST00000447641 KIFC3Q9BVG8 833 aa15.58■□□□□ 0.08
SREBF1-207ENST00000447641 PRMT7Q9NVM4 692 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-207ENST00000447641 PIN4Q9Y237 131 aaKnown RBP15.58■□□□□ 0.08
SREBF1-207ENST00000447641 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
SREBF1-207ENST00000447641 PCDHB7Q9Y5E2 793 aa15.58■□□□□ 0.08
SREBF1-207ENST00000447641 A0A1W2PQ27 194 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 A0A1W2PQ64 194 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 A0A1W2PQD8 194 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 LINC01553A4QN01 128 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 TTLL13PA6NNM8 815 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 B4GALT5O43286 388 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 ERLIN2O94905 339 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 LINC00271P0C7V0 271 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 SKIP12755 728 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 MAPK6Q16659 721 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 CNNM4Q6P4Q7 775 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 TAS1R3Q7RTX0 852 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 TMEM161BQ8NDZ6 487 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 DDX12PQ92771 950 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 FIZ1Q96SL8 496 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 YME1L1Q96TA2 773 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 FAM13BQ9NYF5 915 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 LARSQ9P2J5 1176 aaKnown RBP15.57■□□□□ 0.08
SREBF1-207ENST00000447641 KCNH3Q9ULD8 1083 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 CNTNAP2Q9UHC6 1331 aa15.57■□□□□ 0.08
SREBF1-207ENST00000447641 CCDC169A6NNP5 214 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 PI4K2BG5E9Z4 385 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 K7ERI5 159 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 POLR2DO15514 142 aaKnown RBP15.56■□□□□ 0.08
SREBF1-207ENST00000447641 EDN1P05305 212 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 RAB27AP51159 221 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 NCKAP1LP55160 1127 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-207ENST00000447641 NCBP1Q09161 790 aaKnown RBP15.56■□□□□ 0.08
SREBF1-207ENST00000447641 NT5DC1Q5TFE4 455 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 TWF2Q6IBS0 349 aaKnown RBP15.56■□□□□ 0.08
SREBF1-207ENST00000447641 NOTUMQ6P988 496 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 CMTR2Q8IYT2 770 aaKnown RBP15.56■□□□□ 0.08
SREBF1-207ENST00000447641 CPB2Q96IY4 423 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 GDPD2Q9HCC8 539 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 KMT5AQ9NQR1 393 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 FAM105AQ9NUU6 356 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 LRFN2Q9ULH4 789 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 PCDHB2Q9Y5E7 798 aa15.56■□□□□ 0.08
SREBF1-207ENST00000447641 RALGAPA2Q2PPJ7 1873 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 PHLPP2Q6ZVD8 1323 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 FRMD3A2A2Y4 597 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 SLC16A4O15374 487 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 MBD3O95983 291 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 PRKCBP05771 671 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 MAPTP10636 758 aaKnown RBP15.55■□□□□ 0.08
SREBF1-207ENST00000447641 SCP2P22307 547 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 SMTNP53814 917 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 ERVK-21P61565 698 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 SMG8Q8ND04 991 aaKnown RBP15.55■□□□□ 0.08
SREBF1-207ENST00000447641 CLP1Q92989 425 aaKnown RBP15.55■□□□□ 0.08
SREBF1-207ENST00000447641 DHX58Q96C10 678 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 CASD1Q96PB1 797 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 PYM1Q9BRP8 204 aaKnown RBP15.55■□□□□ 0.08
SREBF1-207ENST00000447641 MAGEF1Q9HAY2 307 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 PARVGQ9HBI0 331 aa15.55■□□□□ 0.08
SREBF1-207ENST00000447641 ZNF318Q5VUA4 2279 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-207ENST00000447641 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 ACTN4O43707 911 aaKnown RBP15.54■□□□□ 0.08
SREBF1-207ENST00000447641 FAM13AO94988 1023 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 SLFN14P0C7P3 912 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 FGFR1P11362 822 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 PFKFB1P16118 471 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 GATMP50440 423 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 PRPF4BQ13523 1007 aaKnown RBP15.54■□□□□ 0.08
SREBF1-207ENST00000447641 CLLU1OSQ5K130 101 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 DYMQ7RTS9 669 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 MYCT1Q8N699 235 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 CNNM3Q8NE01 707 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 C7orf25Q9BPX7 421 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 STRA6Q9BX79 667 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 EIF2AQ9BY44 585 aaKnown RBP15.54■□□□□ 0.08
SREBF1-207ENST00000447641 TMEM117Q9H0C3 514 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 ST6GALNAC4Q9H4F1 302 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 PDZD7Q9H5P4 517 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 UBE2ZQ9H832 354 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-207ENST00000447641 PTPRHQ9HD43 1115 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 USP25Q9UHP3 1055 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 MTUS1Q9ULD2 1270 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 USP20Q9Y2K6 914 aa15.54■□□□□ 0.08
SREBF1-207ENST00000447641 MYO15AQ9UKN7 3530 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 MEIS3P2A8K0S8 358 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 H0YCG3 227 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 INPPL1O15357 1258 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 HOXA2O43364 376 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 TRAK2O60296 914 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 KRT18P05783 430 aaKnown RBP15.53■□□□□ 0.08
SREBF1-207ENST00000447641 IL9P15248 144 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 AGMOQ6ZNB7 445 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 HAUS6Q7Z4H7 955 aa15.53■□□□□ 0.08
SREBF1-207ENST00000447641 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms