RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 DBX2Q6ZNG2 339 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 FAM129CQ86XR2 697 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 SLC44A5Q8NCS7 719 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 ACER1Q8TDN7 264 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 P2RX7Q99572 595 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 VCPKMTQ9H867 229 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 GMIPQ9P107 970 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 KLHL14Q9P2G3 628 aa9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 GPR55Q9Y2T6 319 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-206ENST00000447024 RBBP6Q7Z6E9 1792 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 CYP2D7A0A087X1C5 515 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 SIGLEC6O43699 453 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 FGRP09769 529 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 SDSP20132 328 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 CTGFP29279 349 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 CAP1Q01518 475 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 PPARAQ07869 468 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 SHROOM1Q2M3G4 852 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 GALNT18Q6P9A2 607 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 IGDCC3Q8IVU1 814 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 CCAR1Q8IX12 1150 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 MKL1Q969V6 931 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 ARHGAP39Q9C0H5 1083 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 RBPJLQ9UBG7 517 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 PCDHB14Q9Y5E9 798 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 TAF6LQ9Y6J9 622 aa9.15□□□□□ -0.94
SMARCE1-206ENST00000447024 GREB1LQ9C091 1923 aaPredicted RBP9.15□□□□□ -0.95
SMARCE1-206ENST00000447024 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 IGKV6D-41A0A0C4DH26 115 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 A0A1W2PRG0 241 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 STRNO43815 780 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 ORC4O43929 436 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 ADCY3O60266 1144 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 TTLL1O95922 423 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 MPOP05164 745 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 CELA3BP08861 270 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 EEF2P13639 858 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 COPB2P35606 906 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 FLT3LGP49771 235 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 PRKCZQ05513 592 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 TMC6Q7Z403 805 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 ZDHHC14Q8IZN3 488 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 SYT8Q8NBV8 401 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 SHCBP1Q8NEM2 672 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 RUFY2Q8WXA3 655 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 RILPL2Q969X0 211 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 SEC62Q99442 399 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 PRDM14Q9GZV8 571 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 RNF41Q9H4P4 317 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
SMARCE1-206ENST00000447024 RAD50Q92878 1312 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 SLC15A5A6NIM6 579 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 SORBS3O60504 671 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 SLC25A27O95847 323 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 FGAP02671 866 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 GJB1P08034 283 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 TSPY3P0CV98 308 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 TSPY8P0CW00 308 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 HSPD1P10809 573 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 CCDC178Q5BJE1 867 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 SND1Q7KZF4 910 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 PLEKHH3Q7Z736 793 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 ABRAQ8N0Z2 381 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 GMCL1P1Q8NEA9 526 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 FAM227BQ96M60 508 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 DSCC1Q9BVC3 393 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 LRRC3Q9BY71 257 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 TANGO6Q9C0B7 1094 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 BRMS1Q9HCU9 246 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 TXNRD2Q9NNW7 524 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 MTMR4Q9NYA4 1195 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 CTNNA3Q9UI47 895 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 GJD2Q9UKL4 321 aa9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMARCE1-206ENST00000447024 CENPFP49454 3210 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 A0A0D9SFI3 127 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 FOXP2O15409 715 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 FLOT1O75955 427 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 HMGCRP04035 888 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 ARL4AP40617 200 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 RGS2P41220 211 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 SOX10P56693 466 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 NFKB2Q00653 900 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 TTC22Q5TAA0 569 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 RCSD1Q6JBY9 416 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 CENPQQ7L2Z9 268 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 USP6NLQ92738 828 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 CEP95Q96GE4 821 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 MROH8Q9H579 483 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 CHST7Q9NS84 486 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 TCP11L1Q9NUJ3 509 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 KBTBD4Q9NVX7 518 aa9.12□□□□□ -0.95
SMARCE1-206ENST00000447024 ERVK13-1Q9NX77 482 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms