RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TRIP10Q15642 601 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 SEPT9Q9UHD8 586 aaPredicted RBP19.75■□□□□ 0.75
SHANK3-203ENST00000445220 MADDQ8WXG6 1647 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 HLFQ16534 295 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 MIS18BP1Q6P0N0 1132 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 SNRNP27Q8WVK2 155 aaKnown RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 CYP26B1Q9NR63 512 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 CYP2D7A0A087X1C5 515 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 GTPBP10A4D1E9 387 aaKnown RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 FOXN1O15353 648 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 KRT17Q04695 432 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 LAMB3Q13751 1172 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 SYDE1Q6ZW31 735 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 RYBPQ8N488 228 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 MS4A14Q96JA4 679 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 TSSK1BQ9BXA7 367 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 SNX25Q9H3E2 840 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 RBM12Q9NTZ6 932 aaKnown RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 GDF11O95390 407 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 PLEKHA8P1O95397 391 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 ORC2Q13416 577 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 NR1I3Q14994 352 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 HSPH1Q92598 858 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 PBXIP1Q96AQ6 731 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 ANO3Q9BYT9 981 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 NPHS2Q9NP85 383 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 ADGRB3O60242 1522 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 FAM47DPA6NHR8 397 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 ADCY3O60266 1144 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 C4orf50Q6ZRC1 276 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 OR2W6PQ8NHA6 318 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 SCG3Q8WXD2 468 aaKnown RBP19.74■□□□□ 0.75
SHANK3-203ENST00000445220 NARFQ9UHQ1 456 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 BCORL1Q5H9F3 1711 aa19.74■□□□□ 0.75
SHANK3-203ENST00000445220 GRIN3BO60391 1043 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 TMEM179Q6ZVK1 233 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ARL8AQ96BM9 186 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 SLC13A1Q9BZW2 595 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ROPN1BQ9BZX4 212 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 BHMT2Q9H2M3 363 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ROPN1Q9HAT0 212 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 UBN1Q9NPG3 1134 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ZFATQ9P243 1243 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 USP17L3A6NCW0 530 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 USP17L4A6NCW7 530 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 SERPINI2O75830 405 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 FTLP02792 175 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ALDH18A1P54886 795 aaKnown RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 USP17L1Q7RTZ2 530 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 MYCBPAPQ8TBZ2 947 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 RNF25Q96BH1 459 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 TEKT2Q9UIF3 430 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 SSU72P8A0A1W2PR75 194 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ANP32DO95626 131 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 CD58P19256 250 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ERFP50548 548 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 LRRC8BQ6P9F7 803 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 DCAF4Q8WV16 495 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 CCND2P30279 289 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 TFAMQ00059 246 aaKnown RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 LRRC8EQ6NSJ5 796 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 POTEAQ6S8J7 498 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ALKBH8Q96BT7 664 aaKnown RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 FAM8A1Q9UBU6 413 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 NXF1Q9UBU9 619 aaKnown RBP19.73■□□□□ 0.75
SHANK3-203ENST00000445220 ATP11BQ9Y2G3 1177 aa19.73■□□□□ 0.75
SHANK3-203ENST00000445220 C16orf96A6NNT2 1141 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 DALRD3Q5D0E6 543 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 WDR93Q6P2C0 686 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 CCNYL1Q8N7R7 359 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 NAF1Q96HR8 494 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 PDE5AO76074 875 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 SMARCA1P28370 1054 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 FXR1P51114 621 aaKnown RBP eCLIP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 TRIM28Q13263 835 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 DRAP1Q14919 205 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 ADCK1Q86TW2 530 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 RAD54LQ92698 747 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 GCOM2Q9BZD3 368 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 GID8Q9NWU2 228 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 SRP68Q9UHB9 627 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 SEC24DO94855 1032 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 TBC1D10BQ4KMP7 808 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 C1orf54Q8WWF1 131 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 SEPT3Q9UH03 358 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 PRDM4Q9UKN5 801 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 ABT1Q9ULW3 272 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 SCP2P22307 547 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 CARSP49589 748 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 COASYQ13057 564 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 KCNB1Q14721 858 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 PFKFB3Q16875 520 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 TBC1D10CQ8IV04 446 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 MB21D2Q8IYB1 491 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 TMEM35BQ8NCS4 154 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.72■□□□□ 0.754e-6■■■■□ 25.4
SHANK3-203ENST00000445220 EME1Q96AY2 570 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 PAMP19021 973 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 CATSPER3Q86XQ3 398 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms