RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ZFATQ9P243 1243 aa20.37■□□□□ 0.85
PMPCB-204ENST00000444457 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.37■□□□□ 0.85
PMPCB-204ENST00000444457 TMX2Q9Y320 296 aa20.37■□□□□ 0.85
PMPCB-204ENST00000444457 BZW2Q9Y6E2 419 aaKnown RBP20.37■□□□□ 0.85
PMPCB-204ENST00000444457 AP1G2O75843 785 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 SLITRK3O94933 977 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 VIMP08670 466 aaKnown RBP20.36■□□□□ 0.85
PMPCB-204ENST00000444457 KRT16P08779 473 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 POLD1P28340 1107 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 BNIP1Q12981 228 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 PPP2R5CQ13362 524 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 DYDC2Q96IM9 177 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 RAB17Q9H0T7 212 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 PABPC3Q9H361 631 aaKnown RBP20.36■□□□□ 0.85
PMPCB-204ENST00000444457 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 TMOD2Q9NZR1 351 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 ZMYM2Q9UBW7 1377 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 MYH11P35749 1972 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 SFI1A8K8P3 1242 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 EIF3DO15371 548 aaKnown RBP eCLIP20.36■□□□□ 0.85
PMPCB-204ENST00000444457 TGFB1I1O43294 461 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 CHMP2AO43633 222 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 FAM13AO94988 1023 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 COPS2P61201 443 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 SLC15A2Q16348 729 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 KCTD19Q17RG1 926 aaPredicted RBP20.36■□□□□ 0.85
PMPCB-204ENST00000444457 CCDC174Q6PII3 467 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 C1orf186Q6ZWK4 172 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 SLFN11Q7Z7L1 901 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 TPH2Q8IWU9 490 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
PMPCB-204ENST00000444457 NEK9Q8TD19 979 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 SIX2Q9NPC8 291 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 ZDHHC18Q9NUE0 388 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 STXBP5LQ9Y2K9 1186 aa20.36■□□□□ 0.85
PMPCB-204ENST00000444457 A8MUI8 341 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 AGTP01019 485 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 POLR2MP0CAP2 368 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 RAB27AP51159 221 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 PDE6CP51160 858 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 THEMIS2Q5TEJ8 643 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 TEX9Q8N6V9 391 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 TPCN2Q8NHX9 752 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 SLC5A5Q92911 643 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 KLHL29Q96CT2 875 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 ADAM22Q9P0K1 906 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 CPSF2Q9P2I0 782 aaKnown RBP20.35■□□□□ 0.85
PMPCB-204ENST00000444457 PRKCIP41743 596 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 MSH2P43246 934 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 RANBP17Q9H2T7 1088 aaKnown RBP20.35■□□□□ 0.85
PMPCB-204ENST00000444457 AZI2Q9H6S1 392 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 GCNT4Q9P109 453 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 SUCLA2Q9P2R7 463 aaPredicted RBP20.35■□□□□ 0.85
PMPCB-204ENST00000444457 USP15Q9Y4E8 981 aaPredicted RBP20.35■□□□□ 0.85
PMPCB-204ENST00000444457 PCDHB13Q9Y5F0 798 aa20.35■□□□□ 0.85
PMPCB-204ENST00000444457 ATP8B3O60423 1300 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 CLRN2A0PK11 232 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 SPDYE2BA6NHP3 402 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 SPDYE6P0CI01 402 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 NMT1P30419 496 aaKnown RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 PRELPP51888 382 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 PMS2P54278 862 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 GRIPAP1Q4V328 841 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 ASRGL1Q7L266 308 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 DHX37Q8IY37 1157 aaKnown RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 MYCT1Q8N699 235 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 TRIM51Q9BSJ1 452 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 AJAP1Q9UKB5 411 aaPredicted RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 ZBTB21Q9ULJ3 1066 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 GTPBP10A4D1E9 387 aaKnown RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 RGS16O15492 202 aaPredicted RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 WFS1O76024 890 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 NEFHP12036 1026 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 JAM2P57087 298 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 UBXN2AP68543 259 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 IFI35P80217 286 aaPredicted RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 DENND2CQ68D51 928 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 PEX26Q7Z412 305 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 BORCS6Q96GS4 357 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 IFT74Q96LB3 600 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 OSBPL1AQ9BXW6 950 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 NAGPAQ9UK23 515 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 TTC7AQ9ULT0 858 aaPredicted RBP20.34■□□□□ 0.85
PMPCB-204ENST00000444457 LOXHD1Q8IVV2 1947 aa20.34■□□□□ 0.85
PMPCB-204ENST00000444457 FRMPD4Q14CM0 1322 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 ZBTB39O15060 712 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 EVI5O60447 810 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 GAS7O60861 476 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 ATP4AP20648 1035 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 NFIL3Q16649 462 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 PTPROQ16827 1216 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 DUPD1Q68J44 220 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 SLC30A9Q6PML9 568 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 RNF25Q96BH1 459 aaPredicted RBP20.33■□□□□ 0.85
PMPCB-204ENST00000444457 NAF1Q96HR8 494 aaKnown RBP20.33■□□□□ 0.85
PMPCB-204ENST00000444457 PARVGQ9HBI0 331 aa20.33■□□□□ 0.85
PMPCB-204ENST00000444457 IRF6O14896 467 aa20.32■□□□□ 0.84
PMPCB-204ENST00000444457 LACTBP83111 547 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms