RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 KIAA1024Q9UPX6 916 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 NPHP3-ACAD11A0A0J9YXS1 232 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SPECC1L-ADORA2AF8WAN1 911 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ADCY1Q08828 1119 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 NT5DC3Q86UY8 548 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 EMILIN3Q9NT22 766 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ATP8A2Q9NTI2 1148 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PIK3CAP42336 1068 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 RTP1P59025 263 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 HES6Q96HZ4 224 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 DDX50Q9BQ39 737 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 SMIM31A0A1B0GVY4 71 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 VIL1P09327 827 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 TSPY3P0CV98 308 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TSPY8P0CW00 308 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 RPL21P46778 160 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 GPC5P78333 572 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 GRM4Q14833 912 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PRELID2Q8N945 189 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SDR42E1Q8WUS8 393 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SAYSD1Q9NPB0 183 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 OATP04181 439 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 RASA1P20936 1047 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 IZUMO2Q6UXV1 221 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TIPINQ9BVW5 301 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 MANSC1Q9H8J5 431 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.35□□□□□ -1.551e-6■■■□□ 19
HERC1-201ENST00000443617 TMOD4Q9NZQ9 345 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PHTF1Q9UMS5 762 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PDE8BO95263 885 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 KCNJ1P48048 391 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 MTA1Q13330 715 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 DPY19L2Q6NUT2 758 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 IRF2BP2Q7Z5L9 587 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 CADPS2Q86UW7 1296 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 GRK7Q8WTQ7 553 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 NUP85Q9BW27 656 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 RTCBQ9Y3I0 505 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 PCDHB13Q9Y5F0 798 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PALM3A6NDB9 673 aaPredicted RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 LYNP07948 512 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 IRX4P78413 519 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TROAPQ12815 778 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ITGA9Q13797 1035 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 MYBPC3Q14896 1274 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TRIM59Q8IWR1 403 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ZNF75CPQ92670 426 aaPredicted RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 MORC4Q8TE76 937 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ALG3Q92685 438 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 CFAP57Q96MR6 1250 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 GMEB1Q9Y692 573 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TSPOAP1O95153 1857 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 POC1B-GALNT4F8VUJ3 575 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 NDC80O14777 642 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PHKG2P15735 406 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 CA4P22748 312 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 GRAMD1BQ3KR37 738 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SLFN11Q7Z7L1 901 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SENP1Q9P0U3 644 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 NR2E1Q9Y466 385 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SLC16A3O15427 465 aaKnown RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 TRPA1O75762 1119 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 BCRP11274 1271 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 MPP2Q14168 576 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 LIN9Q5TKA1 542 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 THEMISQ8N1K5 641 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ZMYND8Q9ULU4 1186 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 TFAP4Q01664 338 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 P3H1Q32P28 736 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 RFWD3Q6PCD5 774 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 CYFIP1Q7L576 1253 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 BRIP1Q9BX63 1249 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 DNAJC12Q9UKB3 198 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 RPTORQ8N122 1335 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 SYNGAP1Q96PV0 1343 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 CYP2J2P51589 502 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 C16orf87Q6PH81 154 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 B3GNT6Q6ZMB0 384 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ICA1LQ8NDH6 482 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 TBCKQ8TEA7 893 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 SLC13A5Q86YT5 568 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 TTC25Q96NG3 672 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ECSITQ9BQ95 431 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 KLHL4Q9C0H6 718 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 TIMMDC1Q9NPL8 285 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 PRKAG3Q9UGI9 489 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 PHF24Q9UPV7 400 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ALG6Q9Y672 507 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 COMTP21964 271 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ARFIP2P53365 341 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 FAM69CQ0P6D2 419 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 KRT72Q14CN4 511 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 SEC23AQ15436 765 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 FOXP3Q9BZS1 431 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ZDHHC18Q9NUE0 388 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 LGALS13Q9UHV8 139 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms