RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 TRIM25Q14258 630 aaKnown RBP6.36□□□□□ -1.39
VPS50-206ENST00000443443 UGT8Q16880 541 aa6.36□□□□□ -1.39
VPS50-206ENST00000443443 CT47A1Q5JQC4 288 aaPredicted RBP6.36□□□□□ -1.39
VPS50-206ENST00000443443 EAF2Q96CJ1 260 aaPredicted RBP6.36□□□□□ -1.39
VPS50-206ENST00000443443 PRDM12Q9H4Q4 367 aa6.36□□□□□ -1.39
VPS50-206ENST00000443443 SORCS3Q9UPU3 1222 aa6.36□□□□□ -1.39
VPS50-206ENST00000443443 TMA7Q9Y2S6 64 aaKnown RBP6.36□□□□□ -1.39
VPS50-206ENST00000443443 A0A1W2PR48 441 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 PEX11BO96011 259 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 BPIP17213 487 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 GZMKP49863 264 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 MRPL49Q13405 166 aaKnown RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 PDCD1Q15116 288 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 PITRM1Q5JRX3 1037 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 XYLT1Q86Y38 959 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 LYSMD2Q8IV50 215 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 ZNF276Q8N554 614 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 GLB1L3Q8NCI6 653 aaPredicted RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 CPT1CQ8TCG5 803 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 SLC25A43Q8WUT9 341 aaPredicted RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 LARP4BQ92615 738 aaKnown RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 HAS1Q92839 578 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 CHFRQ96EP1 664 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 CDC5LQ99459 802 aaKnown RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 KCTD10Q9H3F6 313 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 SLITRK6Q9H5Y7 841 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 SPON1Q9HCB6 807 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 TOPORSQ9NS56 1045 aaPredicted RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 EIF2B4Q9UI10 523 aaKnown RBP6.35□□□□□ -1.39
VPS50-206ENST00000443443 EDARQ9UNE0 448 aa6.35□□□□□ -1.39
VPS50-206ENST00000443443 WDR33Q9C0J8 1336 aaKnown RBP6.34□□□□□ -1.39
VPS50-206ENST00000443443 ULK1O75385 1050 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 RECQL4O94761 1208 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 CLSTN1O94985 981 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 SCAF4O95104 1147 aaKnown RBP6.34□□□□□ -1.39
VPS50-206ENST00000443443 LTA4HP09960 611 aaKnown RBP6.34□□□□□ -1.39
VPS50-206ENST00000443443 SESN3P58005 492 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 APBA1Q02410 837 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 DPTQ07507 201 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 C1QL3Q5VWW1 255 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 STRA8Q7Z7C7 330 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 RNF180Q86T96 592 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 THNSL2Q86YJ6 484 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 PSMD1Q99460 953 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 ENKD1Q9H0I2 346 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 CAAP1Q9H8G2 361 aa6.34□□□□□ -1.39
VPS50-206ENST00000443443 GOLGA8AA7E2F4 631 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 GYPEP15421 78 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 HSD3B2P26439 372 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 PTGS2P35354 604 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 SOX5P35711 763 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 INHBCP55103 352 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 WNT3AP56704 352 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 CDK17Q00537 523 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 DCAF17Q5H9S7 520 aaPredicted RBP6.33□□□□□ -1.4
VPS50-206ENST00000443443 ABHD15Q6UXT9 468 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 CERS3Q8IU89 383 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 SYNE4Q8N205 404 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 CLRN3Q8NCR9 226 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 CHAC2Q8WUX2 184 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 IKZF4Q9H2S9 585 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 GPRC5BQ9NZH0 403 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 CDY2AQ9Y6F7 541 aa6.33□□□□□ -1.4
VPS50-206ENST00000443443 A0A087X1B8 175 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 PRR5-ARHGAP8B1AHC4 643 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 FSCN1Q16658 493 aaKnown RBP6.32□□□□□ -1.4
VPS50-206ENST00000443443 NAIF1Q69YI7 327 aaPredicted RBP6.32□□□□□ -1.4
VPS50-206ENST00000443443 IQSEC1Q6DN90 963 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 HTR3DQ70Z44 454 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 ZNF627Q7L945 461 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 SLC41A1Q8IVJ1 513 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 AMER2Q8N7J2 671 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 TRPS1Q9UHF7 1281 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 DPP7Q9UHL4 492 aa6.32□□□□□ -1.4
VPS50-206ENST00000443443 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS50-206ENST00000443443 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
VPS50-206ENST00000443443 VPS72Q15906 364 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 C19orf54Q5BKX5 351 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 CRB2Q5IJ48 1285 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 MDM1Q8TC05 714 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 SNX33Q8WV41 574 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 RAX2Q96IS3 184 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 ACAP3Q96P50 834 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 PDCD2LQ9BRP1 358 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 TTPALQ9BTX7 342 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 LSM14BQ9BX40 385 aaKnown RBP6.31□□□□□ -1.4
VPS50-206ENST00000443443 CPEB1Q9BZB8 566 aaKnown RBP6.31□□□□□ -1.4
VPS50-206ENST00000443443 POGKQ9P215 609 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
VPS50-206ENST00000443443 ZMYM3Q14202 1370 aa6.31□□□□□ -1.4
VPS50-206ENST00000443443 RAMP2O60895 175 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 ITGA10O75578 1167 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 ENPP1P22413 925 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 CTSSP25774 331 aa6.3□□□□□ -1.4
VPS50-206ENST00000443443 ADSLP30566 484 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms