RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 BRF1Q92994 677 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MAELQ96JY0 434 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 SEZ6LQ9BYH1 1024 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 API5Q9BZZ5 524 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 DHX36Q9H2U1 1008 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 IGFLR1Q9H665 355 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 DISC1Q9NRI5 854 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SCHIP1Q9P0W5 487 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 LRP2BPQ9P2M1 347 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 IP6K2Q9UHH9 426 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CCPG1Q9ULG6 757 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TMCC3Q9ULS5 477 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ASB3Q9Y575 518 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MYPNQ86TC9 1320 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 NRXN1Q9ULB1 1477 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TLDC2A0PJX2 215 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 AGPSO00116 658 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 RFXAPO00287 272 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MATN2O00339 956 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KRT86O43790 486 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SRGAP2O75044 1071 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 RAB11FIP3O75154 756 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SUN1O94901 812 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GNA14O95837 355 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SLC10A3P09131 477 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CCDC159P0C7I6 412 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GFAPP14136 432 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 RAG1P15918 1043 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PORP16435 677 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 CTNNA1P35221 906 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 RPIAP49247 311 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PEX5P50542 639 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 USP11P51784 963 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ZNF132P52740 706 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GEMIN4P57678 1058 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 PTK7Q13308 1070 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KPNB1Q14974 876 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 SUZ12Q15022 739 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 PPP2R5BQ15173 497 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 C15orf59Q2T9L4 293 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 PRAMEF19Q5SWL8 479 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ZCCHC8Q6NZY4 707 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 FBXO46Q6PJ61 603 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 LMBR1LQ6UX01 489 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PRR23CQ6ZRP0 262 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 OTOP2Q7RTS6 562 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ALYREFQ86V81 257 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 EXOC3L1Q86VI1 746 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KSR1Q8IVT5 923 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 BRSK2Q8IWQ3 736 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GOLM1Q8NBJ4 401 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 STKLD1Q8NE28 680 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 LPIN2Q92539 896 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 COA7Q96BR5 231 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CHMP6Q96FZ7 201 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PRMT6Q96LA8 375 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 GSDMAQ96QA5 445 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PANX2Q96RD6 677 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TANGO6Q9C0B7 1094 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PRDM12Q9H4Q4 367 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GREM2Q9H772 168 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ETNK1Q9HBU6 452 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 COMMD8Q9NX08 183 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SELENONQ9NZV5 590 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CTNNAL1Q9UBT7 734 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GTF3C4Q9UKN8 822 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TLL2Q9Y6L7 1015 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SBNO2Q9Y2G9 1366 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ADGRB2O60241 1585 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TNS2Q63HR2 1409 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TBKBP1A7MCY6 615 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 YDJCA8MPS7 323 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 A8MUI8 341 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 FANCGO15287 622 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 BIRC5O15392 142 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TTI1O43156 1089 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 YEATS4O95619 227 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ASMTLO95671 621 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 OXSR1O95747 527 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 ACADSP16219 412 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TM4SF1P30408 202 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ARL1P40616 181 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 IFNAR2P48551 515 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MMP16P51512 607 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 HMGCS2P54868 508 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CCL23P55773 120 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 NLRP12P59046 1061 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 HPCAP84074 193 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CDK17Q00537 523 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TAF12Q16514 161 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SPRED3Q2MJR0 410 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ZCWPW2Q504Y3 356 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PDCD4Q53EL6 469 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 LACTB2Q53H82 288 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 SH3D19Q5HYK7 790 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CEP78Q5JTW2 689 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 BEND3Q5T5X7 828 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PPP2R2DQ66LE6 453 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 RBM43Q6ZSC3 357 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 BPHLQ86WA6 291 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms