RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, human

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERGIC3-208	ENST00000442139	EXOC1	Q9NV70	894 aa		13.66	□□□□□ -0.22
ERGIC3-208	ENST00000442139	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.66	□□□□□ -0.22
ERGIC3-208	ENST00000442139	CGN	Q9P2M7	1197 aa	Known RBP	13.66	□□□□□ -0.22
ERGIC3-208	ENST00000442139	TBX20	Q9UMR3	447 aa		13.66	□□□□□ -0.22
ERGIC3-208	ENST00000442139	TNFSF13B	Q9Y275	285 aa		13.66	□□□□□ -0.22
ERGIC3-208	ENST00000442139	KIAA0391	O15091	583 aa	Known RBP	13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	TOM1L1	O75674	476 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	GCNT3	O95395	438 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	MBD3	O95983	291 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	HOXA11	P31270	313 aa	Predicted RBP	13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	LIG4	P49917	911 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	CACNB1	Q02641	598 aa	Predicted RBP	13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	ECHDC2	Q86YB7	292 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	MAP4K3	Q8IVH8	894 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	ABI1	Q8IZP0	508 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	BICD1	Q96G01	975 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	ACCS	Q96QU6	501 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	MRPL9	Q9BYD2	267 aa	Known RBP	13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	OSBPL7	Q9BZF2	842 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	RWDD3	Q9Y3V2	267 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	PCDHB2	Q9Y5E7	798 aa		13.65	□□□□□ -0.22
ERGIC3-208	ENST00000442139	KIAA1671	Q9BY89	1806 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	HNRNPDL	O14979	420 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CLDN3	O15551	220 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TLL1	O43897	1013 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	MGEA5	O60502	916 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CSDE1	O75534	798 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	PPP1R37	O75864	691 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	MCF2	P10911	925 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	FGFR4	P22455	802 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	PPP1R2	P41236	205 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	HTRA4	P83105	476 aa	Predicted RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	POU5F1	Q01860	360 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	EHHADH	Q08426	723 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CUL4B	Q13620	913 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	L1TD1	Q5T7N2	865 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	GLB1L	Q6UWU2	654 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	MPZL3	Q6UWV2	235 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	9e-7	■■■□□ 15.6
ERGIC3-208	ENST00000442139	MRPL10	Q7Z7H8	261 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CMTR2	Q8IYT2	770 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CRIPAK	Q8N1N5	446 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	GOLGA5	Q8TBA6	731 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	LINC01599	Q8WXQ3	324 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	STAM	Q92783	540 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	SAMD11	Q96NU1	681 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	FIZ1	Q96SL8	496 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	YME1L1	Q96TA2	773 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	ACO2	Q99798	780 aa	Known RBP	13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TCHP	Q9BT92	498 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	KIFC3	Q9BVG8	833 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	STRA6	Q9BX79	667 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	KANSL3	Q9P2N6	904 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	MYO9B	Q13459	2157 aa		13.64	□□□□□ -0.23
ERGIC3-208	ENST00000442139	GADD45B	O75293	160 aa	Predicted RBP	13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	NR1I2	O75469	434 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	DGKI	O75912	1065 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	RHOBTB3	O94955	611 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	RPN1	P04843	607 aa	Known RBP	13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	LIG1	P18858	919 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	PROZ	P22891	400 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	DEFB103A	P81534	67 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	DPYD	Q12882	1025 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TCTN1	Q2MV58	587 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	NT5DC1	Q5TFE4	455 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	ZNF598	Q86UK7	904 aa	Known RBP	13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	SYCP3	Q8IZU3	236 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	SMARCE1	Q969G3	411 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TSPAN18	Q96SJ8	248 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TMEM117	Q9H0C3	514 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	BLZF1	Q9H2G9	400 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	PDZD7	Q9H5P4	517 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	POLD4	Q9HCU8	107 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	PTPRH	Q9HD43	1115 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	GIT1	Q9Y2X7	761 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	ANK1	P16157	1881 aa		13.63	□□□□□ -0.23
ERGIC3-208	ENST00000442139	B4GALT5	O43286	388 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	ITGA4	P13612	1032 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	NMT1	P30419	496 aa	Known RBP	13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	BMT2	Q1RMZ1	405 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	ZNF568	Q3ZCX4	644 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TPRN	Q4KMQ1	711 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	HS2ST1	Q7LGA3	356 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TAS1R3	Q7RTX0	852 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	LRRC43	Q8N309	656 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	SPATA20	Q8TB22	786 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	ZNF507	Q8TCN5	953 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	URGCP	Q8TCY9	931 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	SP7	Q8TDD2	431 aa	Predicted RBP	13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CPB2	Q96IY4	423 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	CCDC94	Q9BW85	323 aa	Predicted RBP	13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	TARS2	Q9BW92	718 aa	Known RBP	13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	AAAS	Q9NRG9	546 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	LMBRD1	Q9NUN5	540 aa		13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	LAMA2	P24043	3122 aa	Known RBP	13.62	□□□□□ -0.23
ERGIC3-208	ENST00000442139	INPPL1	O15357	1258 aa		13.61	□□□□□ -0.23

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