RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ZBTB21Q9ULJ3 1066 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 SHBGP04278 402 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 COMTP21964 271 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 GKAP1Q5VSY0 366 aaPredicted RBP17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 ZNF746Q6NUN9 644 aaPredicted RBP17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 FAM160B2Q86V87 743 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 CACNA2D3Q8IZS8 1091 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 MORC4Q8TE76 937 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 CEP89Q96ST8 783 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 EPB41L4BQ9H329 900 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 HSPBP1Q9NZL4 362 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 PKD2L1Q9P0L9 805 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 PNMA2Q9UL42 364 aa17.77■□□□□ 0.43
SEMA3B-207ENST00000441915 GOLGA6L7A0A1B0GV03 622 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 H0YIN7 160 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 GZMAP12544 262 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 ITGB5P18084 799 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 CTNNA2P26232 953 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 PTGIRP43119 386 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 MARCKSL1P49006 195 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 MXI1P50539 228 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 MNAT1P51948 309 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 CCDC137Q6PK04 289 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 PGM2Q96G03 612 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 CXorf56Q9H5V9 222 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 KCNH7Q9NS40 1196 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 PLS3P13797 630 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 CCDC13Q8IYE1 715 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 EPS8L1Q8TE68 723 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 TATDN2Q93075 761 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 CENPTQ96BT3 561 aa17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 ACTR5Q9H9F9 607 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-207ENST00000441915 TLDC2A0PJX2 215 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 PLA2G6O60733 806 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 RARRES1P49788 294 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 PEX5P50542 639 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 SLC29A2Q14542 456 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 ERMARDQ5T6L9 678 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 GRHL1Q9NZI5 618 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 MTUS1Q9ULD2 1270 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 BACH1O14867 736 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 SGPL1O95470 568 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 RPL21P46778 160 aaKnown RBP17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 C1orf220Q5T0J3 134 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 CROCCP2Q86T23 111 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 MDM1Q8TC05 714 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 KAT5Q92993 513 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 RNF25Q96BH1 459 aaPredicted RBP17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 CHORDC1Q9UHD1 332 aaPredicted RBP17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 CNOT7Q9UIV1 285 aaKnown RBP17.75■□□□□ 0.43
SEMA3B-207ENST00000441915 ZNF646O15015 1829 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 MAPK13O15264 365 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 MTA2O94776 668 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 GRIPAP1Q4V328 841 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 HAUS6Q7Z4H7 955 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 FAM71AQ8IYT1 594 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 PPM1KQ8N3J5 372 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 CHMP6Q96FZ7 201 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 XPO6Q96QU8 1125 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 PCDHB18PQ96TA0 734 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 FBXO28Q9NVF7 368 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 DBR1Q9UK59 544 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 FEM1BQ9UK73 627 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 TRPC6Q9Y210 931 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 CLRN2A0PK11 232 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 RGS16O15492 202 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 SPOPO43791 374 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 GTF2BQ00403 316 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 STYK1Q6J9G0 422 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 NOP9Q86U38 636 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 CCDC105Q8IYK2 499 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 RUNDC3BQ96NL0 473 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 IWS1Q96ST2 819 aa17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 NOCTQ9UK39 431 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-207ENST00000441915 TULP1O00294 542 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 PMM2O15305 246 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 PYGMP11217 842 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 BRD2P25440 801 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 QARSP47897 775 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 SMTNP53814 917 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 SNRPFP62306 86 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 ADCY2Q08462 1091 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 RASA3Q14644 834 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 C6orf118Q5T5N4 469 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 TTC27Q6P3X3 843 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 ZDHHC14Q8IZN3 488 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 ZNF564Q8TBZ8 553 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 OSBPL7Q9BZF2 842 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 SEMA4AQ9H3S1 761 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms