RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RBM10P98175 930 aaKnown RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 PPP3CAQ08209 521 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 MXD4Q14582 209 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 KIF22Q14807 665 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 NAB2Q15742 525 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 ERCC6LQ2NKX8 1250 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 C1orf220Q5T0J3 134 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 TEX35Q5T0J7 233 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 CDCA2Q69YH5 1023 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 TAS1R3Q7RTX0 852 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 ZBTB8OSQ8IWT0 167 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 GPR161Q8N6U8 529 aaKnown RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 LMO3Q8TAP4 145 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 PARD3BQ8TEW8 1205 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 PSPC1Q8WXF1 523 aaKnown RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 EMID1Q96A84 441 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 TMEM143Q96AN5 459 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 TMEM117Q9H0C3 514 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 ZCCHC17Q9NP64 241 aaKnown RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 COQ4Q9Y3A0 265 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 HYOU1Q9Y4L1 999 aa14.28□□□□□ -0.12
CPSF4-206ENST00000441580 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-206ENST00000441580 NCANO14594 1321 aa14.27□□□□□ -0.12
CPSF4-206ENST00000441580 A0A0A6YYK5 440 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-206ENST00000441580 RBM47A0AV96 593 aaKnown RBP14.27□□□□□ -0.13
CPSF4-206ENST00000441580 GOLGA8IPA6NC78 632 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 GOLGA8JA6NMD2 632 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-206ENST00000441580 ADCY3O60266 1144 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 HBP1O60381 514 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 CELF2O95319 508 aaKnown RBP14.27□□□□□ -0.13
CPSF4-206ENST00000441580 MOCS3O95396 460 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 GH1P01241 217 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 PRLRP16471 622 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 MAPK4P31152 587 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 GPC3P51654 580 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 DLG4P78352 724 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 IRF5Q13568 498 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 LAMC2Q13753 1193 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 CAPSQ13938 189 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 TFDP1Q14186 410 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 GRB14Q14449 540 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 PSMD6Q15008 389 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 GJB7Q6PEY0 223 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 ENOSF1Q7L5Y1 443 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.13
CPSF4-206ENST00000441580 PLEKHO2Q8TD55 490 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 NT5C1BQ96P26 610 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 ADAMTS1Q9UHI8 967 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 NAGPAQ9UK23 515 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 TFR2Q9UP52 801 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 PCDHGC5Q9Y5F6 944 aa14.27□□□□□ -0.13
CPSF4-206ENST00000441580 IGKV6-21A0A0C4DH24 114 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 K7ERI5 159 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 TUBBP07437 444 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 H2AFXP16104 143 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-206ENST00000441580 MFAP3P55082 362 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 ARHGAP1Q07960 439 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 PLCB4Q15147 1175 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 ENOX2Q16206 610 aaKnown RBP14.26□□□□□ -0.13
CPSF4-206ENST00000441580 KIAA0753Q2KHM9 967 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 HSDL1Q3SXM5 330 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 ALKBH5Q6P6C2 394 aaKnown RBP14.26□□□□□ -0.13
CPSF4-206ENST00000441580 GPIHBP1Q8IV16 184 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 FBXL13Q8NEE6 735 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 CAGE1Q8TC20 777 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 CALR3Q96L12 384 aaKnown RBP14.26□□□□□ -0.13
CPSF4-206ENST00000441580 MRPL4Q9BYD3 311 aaKnown RBP14.26□□□□□ -0.13
CPSF4-206ENST00000441580 GPR88Q9GZN0 384 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 R3HDMLQ9H3Y0 253 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 SLC5A4Q9NY91 659 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 ERAP1Q9NZ08 941 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 AGO2Q9UKV8 859 aaKnown RBP14.26□□□□□ -0.13
CPSF4-206ENST00000441580 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
CPSF4-206ENST00000441580 H2AFZP0C0S5 128 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 NAP1L1P55209 391 aaKnown RBP14.25□□□□□ -0.13
CPSF4-206ENST00000441580 CLDN10P78369 228 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 NAA30Q147X3 362 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-206ENST00000441580 ZNF484Q5JVG2 852 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 SMYD5Q6GMV2 418 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 PHLDB3Q6NSJ2 640 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 FBXO38Q6PIJ6 1188 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 MAMDC4Q6UXC1 1216 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 H2AFVQ71UI9 128 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 FNBP1Q96RU3 617 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 FAM213AQ9BRX8 229 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 SYT11Q9BT88 431 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 MSTO1Q9BUK6 570 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms