RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 TRIP13Q15645 432 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 DUOXA2Q1HG44 320 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 LRRC8EQ6NSJ5 796 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PKN3Q6P5Z2 889 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SETD3Q86TU7 594 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 RASSF3Q86WH2 238 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 MRPL48Q96GC5 212 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 PAGE5Q96GU1 130 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 TNIP3Q96KP6 325 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SRPK1Q96SB4 655 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 MRPS26Q9BYN8 205 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 C10orf88Q9H8K7 445 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 BATF3Q9NR55 127 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 POLIQ9UNA4 740 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 LGALS16A8MUM7 142 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SH2B2O14492 632 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 SLC1A1P43005 524 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 KIF23Q02241 960 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 TTLL4Q14679 1199 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 LRRC41Q15345 812 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 DNAL1Q4LDG9 190 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 CCNYL1Q8N7R7 359 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 KRT35Q92764 455 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ZNF560Q96MR9 790 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP46-201ENST00000441222 SPATA16Q9BXB7 569 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 COA1Q9GZY4 146 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SARS2Q9NP81 518 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 RGL1Q9NZL6 768 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SMG5Q9UPR3 1016 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 CLCA2Q9UQC9 943 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ABCC2Q92887 1545 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SLC26A4O43511 780 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 CYBBP04839 570 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PRELPP51888 382 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 BCAR1P56945 870 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 OSTNP61366 133 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 HDLBPQ00341 1268 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 KRT31Q15323 416 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 HIF1AQ16665 826 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 FASTKD1Q53R41 847 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 SARM1Q6SZW1 724 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 DGKHQ86XP1 1220 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 TRIM8Q9BZR9 551 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 GREM2Q9H772 168 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 TBC1D23Q9NUY8 699 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 CLCN6P51797 869 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 CDK17Q00537 523 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ZNF235Q14590 738 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ADCK1Q86TW2 530 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SMYD4Q8IYR2 804 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 ACRBPQ8NEB7 543 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 EDC3Q96F86 508 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 PLEKHA8Q96JA3 519 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 FTOQ9C0B1 505 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP46-201ENST00000441222 SPTLC3Q9NUV7 552 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 DNAJC12Q9UKB3 198 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 TRAF3IP3Q9Y228 551 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PNMA6AP0CW24 399 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 GNA15P30679 374 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 CSTF3Q12996 717 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 TP53BP2Q13625 1128 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 RESP18Q5W5W9 173 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 EFL1Q7Z2Z2 1120 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 CATSPER3Q86XQ3 398 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PPHLN1Q8NEY8 458 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 FAM161BQ96MY7 647 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ABHD10Q9NUJ1 306 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 HIST1H2AGP0C0S8 130 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 IMPDH2P12268 514 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 HIST1H2ADP20671 130 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 VAMP7P51809 220 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 MAGOHP61326 146 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 NFX1Q12986 1120 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 P3H1Q32P28 736 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 C4orf22Q6V702 233 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 DDIASQ8IXT1 998 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PPM1NQ8N819 430 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 BTN2A2Q8WVV5 523 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 HIST1H2AHQ96KK5 128 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SPATA17Q96L03 361 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 HIST1H2AJQ99878 128 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 H2AFJQ9BTM1 129 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 CAB39Q9Y376 341 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 WDR19Q8NEZ3 1342 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 UBA6A0AVT1 1052 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 PI4K2BG5E9Z4 385 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 STXBP3O00186 592 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 BRAFP15056 766 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ANXA11P50995 505 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 PMS1P54277 932 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 RAB14P61106 215 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 STILQ15468 1287 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 C16orf89Q6UX73 402 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 NLRP10Q86W26 655 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 ZNF564Q8TBZ8 553 aaPredicted RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 OTULINQ96BN8 352 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 SCN3BQ9NY72 215 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 FAM170AA1A519 330 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms