RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141	PEX11B	O96011	259 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	MYBL2	P10244	700 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ERVK-21	P61565	698 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	PPARA	Q07869	468 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	CRHR2	Q13324	411 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	PDCD1	Q15116	288 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	CLUL1	Q15846	466 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	TBR1	Q16650	682 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ANO4	Q32M45	955 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ZBTB41	Q5SVQ8	909 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ZNF627	Q7L945	461 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ZBTB46	Q86UZ6	589 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	PNMA8A	Q86V59	439 aa	Predicted RBP	4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	TMPRSS6	Q8IU80	811 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ULK2	Q8IYT8	1036 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	CFHR4	Q92496	578 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	CHMP4C	Q96CF2	233 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	EAF2	Q96CJ1	260 aa	Predicted RBP	4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ORAI2	Q96SN7	254 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	TTPAL	Q9BTX7	342 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	ASPSCR1	Q9BZE9	553 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	OR10A2	Q9H208	303 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	CEP72	Q9P209	647 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	USP18	Q9UMW8	372 aa		4.37	□□□□□ -1.71
VPS8-208	ENST00000441141	KLHL33	A6NCF5	533 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	TMEM191C	A6NGB0	347 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	SNUPN	O95149	360 aa	Known RBP	4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	CLEC2L	P0C7M8	214 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	LMO1	P25800	156 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	GPR3	P46089	330 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	MRE11	P49959	708 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	NEK2	P51955	445 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	EPHB1	P54762	984 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	MEF2A	Q02078	507 aa	Predicted RBP	4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	CT83	Q5H943	113 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	PITRM1	Q5JRX3	1037 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	ODR4	Q5SWX8	454 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	PCSK4	Q6UW60	755 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	FATE1	Q969F0	183 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	FAXDC2	Q96IV6	333 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	SMAD5	Q99717	465 aa	Known RBP	4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	SLC13A1	Q9BZW2	595 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	KCTD10	Q9H3F6	313 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	MS4A5	Q9H3V2	200 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	VTA1	Q9NP79	307 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	SLC2A4RG	Q9NR83	387 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	TCEAL9	Q9UHQ7	104 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	PRSS50	Q9UI38	385 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	CDC42EP3	Q9UKI2	254 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	FAM184B	Q9ULE4	1060 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	CDY2A	Q9Y6F7	541 aa		4.36	□□□□□ -1.71
VPS8-208	ENST00000441141	KRTAP23-1	A1A580	65 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	LCHN	A4D1U4	455 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	GABRD	O14764	452 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	SLC26A4	O43511	780 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	ALDH1L1	O75891	902 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	RBP3	P10745	1247 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	VCAM1	P19320	739 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	RECQL	P46063	649 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	LGALS4	P56470	323 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	PCOLCE	Q15113	449 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	PTPN21	Q16825	1174 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	PLEKHG6	Q3KR16	790 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	TRIM68	Q6AZZ1	485 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	UNQ6494/PRO21346	Q6UXR6	183 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	GPR135	Q8IZ08	494 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	OR14K1	Q8NGZ2	314 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	TGFBRAP1	Q8WUH2	860 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	GCDH	Q92947	438 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	VOPP1	Q96AW1	172 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	TMEM176A	Q96HP8	235 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	UIMC1	Q96RL1	719 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	HAPLN2	Q9GZV7	340 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	QRSL1	Q9H0R6	528 aa	Known RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	SAP30BP	Q9UHR5	308 aa	Known RBP	4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	EDAR	Q9UNE0	448 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	GPR45	Q9Y5Y3	372 aa		4.35	□□□□□ -1.71
VPS8-208	ENST00000441141	PMS2P1	A4D2B8	440 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	FOXN1	O15353	648 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	XPOT	O43592	962 aa	Known RBP	4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	PHF2	O75151	1096 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	MT-CO1	P00395	513 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	LPL	P06858	475 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	BMP5	P22003	454 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	IARS	P41252	1262 aa	Known RBP	4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	SLC16A1	P53985	500 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	RRP1B	Q14684	758 aa	Known RBP	4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	ACAP2	Q15057	778 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	TTF1	Q15361	905 aa	Predicted RBP	4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	ABCB5	Q2M3G0	1257 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	MUM1	Q2TAK8	710 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	INAVA	Q3KP66	663 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	TOR2A	Q5JU69	321 aa		4.34	□□□□□ -1.71
VPS8-208	ENST00000441141	EFCAB2	Q5VUJ9	269 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms