RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 U3KQE9 123 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 PIEZO2Q9H5I5 2752 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 KALRNO60229 2985 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 ASTN1O14525 1302 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 MYH7BA7E2Y1 1941 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CYP2D7A0A087X1C5 515 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 VWA5AO00534 786 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 DYNC1LI2O43237 492 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 FZD6O60353 706 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 EIF5BO60841 1220 aaKnown RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CXCL10P02778 98 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 AMHP03971 560 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CYP2D6P10635 497 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CPA1P15085 419 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 ATXN1P54253 815 aaKnown RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 ANAPC15P60006 121 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 HAND2P61296 217 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 BNIP3Q12983 259 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 COASYQ13057 564 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 ALX1Q15699 326 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 BRDTQ58F21 947 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 IQSEC1Q6DN90 963 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 NFRKBQ6P4R8 1299 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 TMED8Q6PL24 325 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CERS3Q8IU89 383 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 TBC1D10CQ8IV04 446 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CCDC144CPQ8IYA2 1237 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 CCDC105Q8IYK2 499 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 GIMAP7Q8NHV1 300 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 RTP3Q9BQQ7 232 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 C11orf84Q9BUA3 381 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 DCP1AQ9NPI6 582 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 INCENPQ9NQS7 918 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 EGFL7Q9UHF1 273 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 ADAMTS6Q9UKP5 1117 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 ZNF214Q9UL59 606 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 SORCS3Q9UPU3 1222 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 RWDD3Q9Y3V2 267 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 USP15Q9Y4E8 981 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-206ENST00000441089 SLC4A4Q9Y6R1 1079 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 HECTD1Q9ULT8 2610 aa5.55□□□□□ -1.52
PTPN4-206ENST00000441089 MYH7P12883 1935 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 ZMYM6O95789 1325 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 FSD2A1L4K1 749 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 CARNS1A5YM72 827 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 ASB14A6NK59 587 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 PHACTR2O75167 634 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 TNFRSF21O75509 655 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 ABL1P00519 1130 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 APPP05067 770 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 GNAT2P19087 354 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 MCCP23508 829 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 CD96P40200 585 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 CPT1AP50416 773 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 LMNB2Q03252 620 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 SEPT2Q15019 361 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 RABEP1Q15276 862 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 CTR9Q6PD62 1173 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 LRRC8DQ7L1W4 858 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 ANKRD35Q8N283 1001 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 EFHBQ8N7U6 833 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 TMEM102Q8N9M5 508 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-206ENST00000441089 KREMEN2Q8NCW0 462 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 AGBL5Q8NDL9 886 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 NXPE3Q969Y0 559 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 BORCS6Q96GS4 357 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 TTC14Q96N46 770 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 YME1L1Q96TA2 773 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 ZKSCAN3Q9BRR0 538 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 MTG1Q9BT17 334 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-206ENST00000441089 KATNBL1Q9H079 304 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 FBXO40Q9UH90 709 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 ACTL7BQ9Y614 415 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 AKAP13Q12802 2813 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 TENM4Q6N022 2769 aa5.54□□□□□ -1.52
PTPN4-206ENST00000441089 LOC400499M0QZD8 3231 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 NEDD4P46934 1319 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 A0A1W2PRG0 241 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 E7EWF7 191 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 C5orf67F2Z3F1 127 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 MPHOSPH10O00566 681 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 LINC01565O15544 149 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 KPNA6O60684 536 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 NFICP08651 508 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 EDN3P14138 238 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 AOC1P19801 751 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 GUCY1A2P33402 732 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 CTNNB1P35222 781 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 TDO2P48775 406 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 USP11P51784 963 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 ANTXR2P58335 489 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 PURAQ00577 322 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 SOX4Q06945 474 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 PPARAQ07869 468 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 RBL2Q08999 1139 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 ZNF211Q13398 564 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 SNRNP48Q6IEG0 339 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 GIMAP6Q6P9H5 292 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms