RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DGAT1O75907 488 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 SUPT20HL2P0C7V6 817 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 SLC7A5Q01650 507 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 ABHD15Q6UXT9 468 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
LIMD1-202ENST00000440097 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 ZSWIM2Q8NEG5 633 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 MCPH1Q8NEM0 835 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 IFT74Q96LB3 600 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 ZNF302Q9NR11 478 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 DNAJC12Q9UKB3 198 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 MYO1FO00160 1098 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 HNRNPDLO14979 420 aaKnown RBP15.31■□□□□ 0.04
LIMD1-202ENST00000440097 NCKAP1LP55160 1127 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 ZNF571Q7Z3V5 609 aaPredicted RBP15.31■□□□□ 0.04
LIMD1-202ENST00000440097 CREG2Q8IUH2 290 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 MMGT1Q8N4V1 131 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 TMEM161BQ8NDZ6 487 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 BSNDQ8WZ55 320 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
LIMD1-202ENST00000440097 SEPT11Q9NVA2 429 aaKnown RBP15.31■□□□□ 0.04
LIMD1-202ENST00000440097 BZW2Q9Y6E2 419 aaKnown RBP15.31■□□□□ 0.04
LIMD1-202ENST00000440097 SPDYE5A6NIY4 337 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 LRRN2O75325 713 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 CNGA1P29973 690 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 STAT1P42224 750 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIMD1-202ENST00000440097 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 IRF2BP2Q7Z5L9 587 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 POMGNT1Q8WZA1 660 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 PACSIN1Q9BY11 444 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 CXCL11O14625 94 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 SKOR1P84550 965 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 DRAP1Q14919 205 aaPredicted RBP15.3■□□□□ 0.04
LIMD1-202ENST00000440097 ARMC9Q7Z3E5 817 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 RUFY1Q96T51 708 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 POLR3FQ9H1D9 316 aaPredicted RBP15.3■□□□□ 0.04
LIMD1-202ENST00000440097 SNX12Q9UMY4 172 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 AGTPBP1Q9UPW5 1226 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 H0YHG0 523 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
LIMD1-202ENST00000440097 CXCR5P32302 372 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 FNTAP49354 379 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 MYBPC2Q14324 1141 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
LIMD1-202ENST00000440097 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 TMEM143Q96AN5 459 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 R3HDMLQ9H3Y0 253 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 APEX2Q9UBZ4 518 aa15.3■□□□□ 0.04
LIMD1-202ENST00000440097 WDR90Q96KV7 1748 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 SOWAHBA6NEL2 793 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 RBAK-RBAKDNI3L0D1 243 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 PSEN1P49768 467 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
LIMD1-202ENST00000440097 KCTD2Q14681 263 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 SNRNP35Q16560 246 aaKnown RBP15.29■□□□□ 0.04
LIMD1-202ENST00000440097 B4GALNT4Q76KP1 1039 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 OTUD6BQ8N6M0 293 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 MYH10P35580 1976 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 EVI5O60447 810 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 HSF2BPO75031 334 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 KLRC1P26715 233 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 PPP3CAQ08209 521 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 KCTD16Q68DU8 428 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 ALKBH5Q6P6C2 394 aaKnown RBP15.29■□□□□ 0.04
LIMD1-202ENST00000440097 SPATA4Q8NEY3 305 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 SLC7A3Q8WY07 619 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 CABS1Q96KC9 395 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 ST6GALNAC4Q9H4F1 302 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 SMARCAL1Q9NZC9 954 aa15.29■□□□□ 0.04
LIMD1-202ENST00000440097 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 F8VZ95 297 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 PJA2O43164 708 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 NCK2O43639 380 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 GGPS1O95749 300 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 OATP04181 439 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 FERP16591 822 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 OSBPP22059 807 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 MXI1P50539 228 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 EPHB4P54760 987 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 EMC2Q15006 297 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 LY6KQ17RY6 165 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 MAP4K3Q8IVH8 894 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 ZC3H15Q8WU90 426 aaKnown RBP15.28■□□□□ 0.04
LIMD1-202ENST00000440097 MPHOSPH6Q99547 160 aaKnown RBP15.28■□□□□ 0.04
LIMD1-202ENST00000440097 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 UBE2TQ9NPD8 197 aaPredicted RBP15.28■□□□□ 0.04
LIMD1-202ENST00000440097 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 PTPRFP10586 1907 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms