RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SMTNP53814 917 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 NCKAP1LP55160 1127 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 STX17P56962 302 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 ERVK-21P61565 698 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TBC1D8BQ0IIM8 1120 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 DMP1Q13316 513 aaPredicted RBP12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 GPNMBQ14956 572 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 NFIL3Q16649 462 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TPD52L1Q16890 204 aaPredicted RBP12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 EDRF1Q3B7T1 1238 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 FAM102BQ5T8I3 360 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 CDKAL1Q5VV42 579 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TRMT1LQ7Z2T5 733 aaKnown RBP12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 FAM114A1Q8IWE2 563 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 C17orf80Q9BSJ5 609 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 KCNH6Q9H252 994 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TBC1D7Q9P0N9 293 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TRAF3IP3Q9Y228 551 aa12.88□□□□□ -0.35
AC009404.1-202ENST00000439955 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 K7ENM7 598 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 PDXKO00764 312 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 MAGEB2O15479 319 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 ZNF286BP0CG31 522 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 MYBP10242 640 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 MARK3P27448 753 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 ARL2P36404 184 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 CASP5P51878 434 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 GTF2BQ00403 316 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 ZP2Q05996 745 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 BFSP2Q13515 415 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 IER5Q5VY09 327 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 GLIS3Q8NEA6 775 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 PRSS33Q8NF86 280 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 RAD9AQ99638 391 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 FGFBP2Q9BYJ0 223 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 POLR3FQ9H1D9 316 aaPredicted RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 GPRC5CQ9NQ84 441 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 SIP14410 1827 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 PHLPP2Q6ZVD8 1323 aa12.87□□□□□ -0.35
AC009404.1-202ENST00000439955 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 HAS3O00219 553 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 GJB5O95377 273 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 C22orf31O95567 290 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 CDC25BP30305 580 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 NMT1P30419 496 aaKnown RBP12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 NAMPTP43490 491 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 NPTX2P47972 431 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 PEX3P56589 373 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 IER5LQ5T953 404 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 FBXO22Q8NEZ5 403 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 TMEM174Q8WUU8 243 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 MRFAP1L1Q96HT8 127 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 CEP63Q96MT8 703 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 RNPEPQ9H4A4 650 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 ARHGAP28Q9P2N2 729 aa12.86□□□□□ -0.35
AC009404.1-202ENST00000439955 ZMYM2Q9UBW7 1377 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 CBFA2T2O43439 604 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 CALUO43852 315 aaPredicted RBP12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 PRPF6O94906 941 aaKnown RBP12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 TPM3P06753 285 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 ATP1A3P13637 1013 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 INSRRP14616 1297 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 HOXD13P35453 343 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 IRS1P35568 1242 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 DNM2P50570 870 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 FANCCQ00597 558 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 FKBP3Q00688 224 aaKnown RBP12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 MYBPC2Q14324 1141 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 MXD4Q14582 209 aaPredicted RBP12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 PTGISQ16647 500 aa12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
AC009404.1-202ENST00000439955 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms