RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 HYOU1Q9Y4L1 999 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 LRRIQ3A6PVS8 624 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-202ENST00000439724 BUB1O43683 1085 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 GAS2O43903 313 aaKnown RBP12.77□□□□□ -0.37
SMAD3-202ENST00000439724 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 CYP2C8P10632 490 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 LIG4P49917 911 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 GPC3P51654 580 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 WDR78Q5VTH9 848 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 MAP1SQ66K74 1059 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-202ENST00000439724 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF572Q7Z3I7 529 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-202ENST00000439724 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 ARHGEF19Q8IW93 802 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 FBXO16Q8IX29 292 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-202ENST00000439724 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-202ENST00000439724 MORF4L1Q9UBU8 362 aa12.77□□□□□ -0.37
SMAD3-202ENST00000439724 A0A0A6YYK5 440 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-202ENST00000439724 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 PDHXO00330 501 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 NOP56O00567 594 aaKnown RBP12.76□□□□□ -0.37
SMAD3-202ENST00000439724 EXTL3O43909 919 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-202ENST00000439724 SLC26A2P50443 739 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 TTLL4Q14679 1199 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
SMAD3-202ENST00000439724 EXOC8Q8IYI6 725 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 MMS19Q96T76 1030 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 TLR10Q9BXR5 811 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 ANKZF1Q9H8Y5 726 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF408Q9H9D4 720 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
SMAD3-202ENST00000439724 UBE2TQ9NPD8 197 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-202ENST00000439724 DIS3Q9Y2L1 958 aaKnown RBP12.76□□□□□ -0.37
SMAD3-202ENST00000439724 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF233A6NK53 670 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 K7ERI5 159 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 TUBBP07437 444 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 H2AFZP0C0S5 128 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 CLDN10P78369 228 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 ITIH3Q06033 890 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 CAPSQ13938 189 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 CCL15Q16663 113 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 ARHGAP44Q17R89 818 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF792Q3KQV3 632 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 HSDL1Q3SXM5 330 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 IER5Q5VY09 327 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 H2AFVQ71UI9 128 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 ARMCX2Q7L311 632 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 DHX37Q8IY37 1157 aaKnown RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 U2AF1L4Q8WU68 220 aaKnown RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 TCP11Q8WWU5 503 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 PSPC1Q8WXF1 523 aaKnown RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 GLG1Q92896 1179 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 CCDC127Q96BQ5 260 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 SPATA33Q96N06 139 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 OSBPL9Q96SU4 736 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 PARD6BQ9BYG5 372 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 EPC1Q9H2F5 836 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 GBA2Q9HCG7 927 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-202ENST00000439724 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
SMAD3-202ENST00000439724 NCANO14594 1321 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 IGKV6-21A0A0C4DH24 114 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 GRID2IPA4D2P6 1211 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 CCDC151A5D8V7 595 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 ADCY3O60266 1144 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMAD3-202ENST00000439724 PALMO75781 387 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 TXNP10599 105 aaKnown RBP12.74□□□□□ -0.37
SMAD3-202ENST00000439724 EFNA5P52803 228 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 PSMD6Q15008 389 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 BRD3Q15059 726 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 PLCB4Q15147 1175 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 C15orf39Q6ZRI6 1047 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-202ENST00000439724 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
SMAD3-202ENST00000439724 FBXL13Q8NEE6 735 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 SEMA4DQ92854 862 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 JPH2Q9BR39 696 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-202ENST00000439724 FAM213AQ9BRX8 229 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 SMARCAD1Q9H4L7 1026 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF446Q9NWS9 450 aa12.74□□□□□ -0.37
SMAD3-202ENST00000439724 AGO2Q9UKV8 859 aaKnown RBP12.74□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms