RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
UBR3-205ENST00000439681 EEF1DP3Q658K8 133 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 LRRC8DQ7L1W4 858 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 SLC9A9Q8IVB4 645 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 TRIM43Q96BQ3 446 aaPredicted RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 EEF2KMTQ96G04 330 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 CPB2Q96IY4 423 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 SRRTQ9BXP5 876 aaKnown RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 ERVK-5Q9HDB9 667 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 SAMSN1Q9NSI8 373 aaKnown RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 CGNQ9P2M7 1197 aaKnown RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 ST3GAL5Q9UNP4 418 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 TNFSF13BQ9Y275 285 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 SQORQ9Y6N5 450 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 A0A0B4J269 797 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 SMTNL1A8MU46 457 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 HNRNPDLO14979 420 aaKnown RBP8.19□□□□□ -1.1
UBR3-205ENST00000439681 NBNO60934 754 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 RPS6KA5O75582 802 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 TOM1L1O75674 476 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 CLTBP09497 229 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 GHRP10912 638 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 GARTP22102 1010 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 CD52P31358 61 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 CYP2C18P33260 490 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 LIG4P49917 911 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 FKBP3Q00688 224 aaKnown RBP8.19□□□□□ -1.1
UBR3-205ENST00000439681 MCL1Q07820 350 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 ADAM9Q13443 819 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 MYBPC2Q14324 1141 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 ATF7IP2Q5U623 682 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 HS2ST1Q7LGA3 356 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 CATSPER4Q7RTX7 472 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 CDR2LQ86X02 465 aaPredicted RBP8.19□□□□□ -1.1
UBR3-205ENST00000439681 CSGALNACT2Q8N6G5 542 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 CCDC155Q8N6L0 562 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 GOLGA5Q8TBA6 731 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 BICD1Q96G01 975 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 TSG101Q99816 390 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 WNT8AQ9H1J5 351 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 HIPK3Q9H422 1215 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 PCIF1Q9H4Z3 704 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 PDZD7Q9H5P4 517 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 AGPAT5Q9NUQ2 364 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 PADI3Q9ULW8 664 aa8.19□□□□□ -1.1
UBR3-205ENST00000439681 LOXHD1Q8IVV2 1947 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 KIAA0355O15063 1070 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 FAM189A1O60320 539 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 ERLIN2O94905 339 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 ZNF18P17022 549 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 SFPQP23246 707 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBR3-205ENST00000439681 NR2F2P24468 414 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 ITGB8P26012 769 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CASP4P49662 377 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 UBXN11Q5T124 520 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CDKAL1Q5VV42 579 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 SLFN12LQ6IEE8 588 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 FILIP1Q7Z7B0 1213 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 USP38Q8NB14 1042 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 VWCEQ96DN2 955 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 TMX1Q9H3N1 280 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 HSPBP1Q9NZL4 362 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 BECN2A8MW95 431 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CETN3O15182 167 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 GPR182O15218 404 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CLDN3O15551 220 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 AKAP3O75969 853 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 RPL13P26373 211 aaKnown RBP8.18□□□□□ -1.1
UBR3-205ENST00000439681 AXLP30530 894 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CYP2J2P51589 502 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CCL23P55773 120 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 NFX1Q12986 1120 aaKnown RBP8.18□□□□□ -1.1
UBR3-205ENST00000439681 DSC3Q14574 896 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 ZBTB41Q5SVQ8 909 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 ARMCX5Q6P1M9 558 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 MPZL3Q6UWV2 235 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CRELD2Q6UXH1 353 aaPredicted RBP8.18□□□□□ -1.1
UBR3-205ENST00000439681 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 NOC3LQ8WTT2 800 aaKnown RBP8.18□□□□□ -1.1
UBR3-205ENST00000439681 POMGNT1Q8WZA1 660 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 BORCS6Q96GS4 357 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 SCLYQ96I15 445 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 FBXL18Q96ME1 805 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CEP63Q96MT8 703 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 CDT1Q9H211 546 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
UBR3-205ENST00000439681 KIAA0100Q14667 2235 aaKnown RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 GOLGA8IPA6NC78 632 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 GOLGA8JA6NMD2 632 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 MGEA5O60502 916 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 TIMP1P01033 207 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 CXCL10P02778 98 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 MCF2P10911 925 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 ATP1A3P13637 1013 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms