RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ARSHQ5FYA8 562 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CBWD3Q5JTY5 395 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CBWD5Q5RIA9 395 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CPNE8Q86YQ8 564 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 FITM2Q8N6M3 262 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CENPTQ96BT3 561 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 RMDN2Q96LZ7 410 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 MXD3Q9BW11 206 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 APEX2Q9UBZ4 518 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 SERPINB13Q9UIV8 391 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CASZ1Q86V15 1759 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 PFASO15067 1338 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 EMSYQ7Z589 1322 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 TNS2Q63HR2 1409 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 AP1G2O75843 785 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ATF7P17544 494 aaPredicted RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 MAPK4P31152 587 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 EPC2Q52LR7 807 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SLFN13Q68D06 897 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 CCDC174Q6PII3 467 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZC3H18Q86VM9 953 aaKnown RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 ANKRD35Q8N283 1001 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 RASGEF1CQ8N431 466 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZNF570Q96NI8 536 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZSWIM1Q9BR11 485 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 RIOX1Q9H6W3 641 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ANAPC7Q9UJX3 599 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SLC12A4Q9UP95 1085 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 AFF2P51816 1311 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 RPTORQ8N122 1335 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 hCG_1984214I3L0E3 225 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 CYP26A1O43174 497 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 GAS7O60861 476 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 NUDT17P0C025 328 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 PRKCIP41743 596 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ITGA8P53708 1063 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 TTC27Q6P3X3 843 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 CRELD2Q6UXH1 353 aaPredicted RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 APBB1IPQ7Z5R6 666 aaPredicted RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 PIGWQ7Z7B1 504 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZNF713Q8N859 430 aaPredicted RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 CYP2W1Q8TAV3 490 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 MAGEC3Q8TD91 643 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 HAUS1Q96CS2 278 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ARHGEF10LQ9HCE6 1279 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.86
COPB1-202ENST00000439561 DLGAP2Q9P1A6 1054 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 PKD1L3Q7Z443 1732 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 A0A0A6YYK5 440 aaPredicted RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 A0A0G2JND7 137 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 GOLGA8SH3BPF8 625 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 GOLGA8MH3BSY2 632 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 DDX3YO15523 660 aaKnown RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 CETN2P41208 172 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZYXQ15942 572 aaKnown RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 FYB2Q5VWT5 728 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 TMEM154Q6P9G4 183 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZDHHC24Q6UX98 284 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SLC13A5Q86YT5 568 aaPredicted RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 DYDC2Q96IM9 177 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SMC6Q96SB8 1091 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SH3GL3Q99963 347 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 EIF2AK1Q9BQI3 630 aaKnown RBP9.69□□□□□ -0.86
COPB1-202ENST00000439561 SAYSD1Q9NPB0 183 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 KLHL11Q9NVR0 708 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 ZFATQ9P243 1243 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 GGA1Q9UJY5 639 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 COG5Q9UP83 839 aa9.69□□□□□ -0.86
COPB1-202ENST00000439561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
COPB1-202ENST00000439561 CHD4Q14839 1912 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 EME2A4GXA9 379 aaPredicted RBP9.68□□□□□ -0.86
COPB1-202ENST00000439561 MAPK13O15264 365 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 CBX6O95503 412 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
COPB1-202ENST00000439561 CHKAP35790 457 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 RASSF2P50749 326 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 PPP1R21Q6ZMI0 780 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 SUPT20HQ8NEM7 779 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 VCXQ9H320 206 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 RXFP1Q9HBX9 757 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 METTL5Q9NRN9 209 aaKnown RBP9.68□□□□□ -0.86
COPB1-202ENST00000439561 ZDHHC18Q9NUE0 388 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 BTNL10A8MVZ5 291 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 GOLGA8RI6L899 631 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 SLC12A3P55017 1021 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 SLC30A9Q6PML9 568 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 PRUNE1Q86TP1 453 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 FBXO11Q86XK2 927 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 CNBD1Q8NA66 436 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 SPOCK2Q92563 424 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 KAT5Q92993 513 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 TRIM4Q9C037 500 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 TMX4Q9H1E5 349 aaPredicted RBP9.68□□□□□ -0.86
COPB1-202ENST00000439561 CD209Q9NNX6 404 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 NPHS2Q9NP85 383 aa9.68□□□□□ -0.86
COPB1-202ENST00000439561 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
COPB1-202ENST00000439561 SERPINA10Q9UK55 444 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms