RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RDH13Q8NBN7 331 aa14.59□□□□□ -0.07
PCNX3-202ENST00000439247 ARHGEF2Q92974 986 aaKnown RBP14.59□□□□□ -0.07
PCNX3-202ENST00000439247 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
PCNX3-202ENST00000439247 GPR88Q9GZN0 384 aa14.59□□□□□ -0.07
PCNX3-202ENST00000439247 TMX4Q9H1E5 349 aaPredicted RBP14.59□□□□□ -0.07
PCNX3-202ENST00000439247 CARD9Q9H257 536 aa14.59□□□□□ -0.07
PCNX3-202ENST00000439247 TRAF3IP3Q9Y228 551 aa14.59□□□□□ -0.07
PCNX3-202ENST00000439247 PCDHA3Q9Y5H8 950 aa14.59□□□□□ -0.07
PCNX3-202ENST00000439247 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 TMEM253P0C7T8 217 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 AKR1B1P15121 316 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 FERP16591 822 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 NPEPPSP55786 919 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 SNAP25P60880 206 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 BIRC2Q13490 618 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 PICALMQ13492 652 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 THEMIS2Q5TEJ8 643 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 CCDC105Q8IYK2 499 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 TMEM237Q96Q45 408 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 NSRP1Q9H0G5 558 aaKnown RBP14.58□□□□□ -0.08
PCNX3-202ENST00000439247 PSTPIP2Q9H939 334 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 ACP6Q9NPH0 428 aa14.58□□□□□ -0.08
PCNX3-202ENST00000439247 ZBTB39O15060 712 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 MAP3K13O43283 966 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 PHF2O75151 1096 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 PYGMP11217 842 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 NMT1P30419 496 aaKnown RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CHKAP35790 457 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CLK2P49760 499 aaKnown RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 MESDQ14696 234 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 TRIP13Q15645 432 aaPredicted RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 HYIQ5T013 277 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 FAM47EQ6ZV65 393 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CYP4X1Q8N118 509 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 ARMC2Q8NEN0 867 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 UTP4Q969X6 686 aaKnown RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 LBHD1Q9BQE6 289 aaPredicted RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CDC42EP4Q9H3Q1 356 aaKnown RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CCDC134Q9H6E4 229 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CTTNBP2NLQ9P2B4 639 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 FAM187AA6NFU0 413 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 TGFB1I1O43294 461 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 SNX1Q13596 522 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 DHX34Q14147 1143 aaKnown RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 PRUNE1Q86TP1 453 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 WDR66Q8TBY9 1149 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 ARHGEF3Q9NR81 526 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 NCANO14594 1321 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 KDM3AQ9Y4C1 1321 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 SUN1O94901 812 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 TNFAIP3P21580 790 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 CCND1P24385 295 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 PRR16Q569H4 304 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 EPM2AIP1Q7L775 607 aaPredicted RBP14.57□□□□□ -0.08
PCNX3-202ENST00000439247 SPATA21Q7Z572 469 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 BHMT2Q9H2M3 363 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 RASAL2Q9UJF2 1139 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 ARFGEF1Q9Y6D6 1849 aa14.57□□□□□ -0.08
PCNX3-202ENST00000439247 NAV1Q8NEY1 1877 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 LINGO3P0C6S8 592 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 ATP2A2P16615 1042 aaKnown RBP14.56□□□□□ -0.08
PCNX3-202ENST00000439247 TNFAIP8L3Q5GJ75 292 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 SPDYE1Q8NFV5 336 aaPredicted RBP14.56□□□□□ -0.08
PCNX3-202ENST00000439247 NLGN2Q8NFZ4 835 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 PIGOQ8TEQ8 1089 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 COA1Q9GZY4 146 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 AAASQ9NRG9 546 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 MTMR4Q9NYA4 1195 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 MTRF1LQ9UGC7 380 aaKnown RBP14.56□□□□□ -0.08
PCNX3-202ENST00000439247 INTUQ9ULD6 942 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 FOXN3O00409 490 aaPredicted RBP14.56□□□□□ -0.08
PCNX3-202ENST00000439247 CALUO43852 315 aaPredicted RBP14.56□□□□□ -0.08
PCNX3-202ENST00000439247 SPATA31C1P0DKV0 1188 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 CETPP11597 493 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 COMTP21964 271 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 TUBP50607 506 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 CYP2J2P51589 502 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 TAF11Q15544 211 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 SPDYCQ5MJ68 293 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 CCHCR1Q8TD31 782 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 C1orf54Q8WWF1 131 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 SYT11Q9BT88 431 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 ETNK1Q9HBU6 452 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 ZNF277Q9NRM2 450 aaPredicted RBP14.56□□□□□ -0.08
PCNX3-202ENST00000439247 RGL1Q9NZL6 768 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 KIF13BQ9NQT8 1826 aa14.56□□□□□ -0.08
PCNX3-202ENST00000439247 PDXKO00764 312 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 LMNB1P20700 586 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 VPS41P49754 854 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 ASRGL1Q7L266 308 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 TGS1Q96RS0 853 aaKnown RBP14.55□□□□□ -0.08
PCNX3-202ENST00000439247 BATF3Q9NR55 127 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 CNOT7Q9UIV1 285 aaKnown RBP14.55□□□□□ -0.08
PCNX3-202ENST00000439247 SCN9AQ15858 1988 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 G3V3G9 751 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 TP73O15350 636 aa14.55□□□□□ -0.08
PCNX3-202ENST00000439247 IRX1P78414 480 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms