RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 TMEM240Q5SV17 173 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 MFSD5Q6N075 450 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 FAM111BQ6SJ93 734 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 ABHD15Q6UXT9 468 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 LILRA3Q8N6C8 439 aaPredicted RBP3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 RIN2Q8WYP3 895 aaPredicted RBP3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 JADE3Q92613 823 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 WWC2-AS2Q96NR7 200 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 OR14A2Q96R54 314 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 SMPD4Q9NXE4 827 aa3.4□□□□□ -1.86
AC009541.1-201ENST00000438279 UBE2QL1A1L167 161 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 KLHL33A6NCF5 533 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 PRAMEF4O60810 478 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 COMTP21964 271 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 DUSP2Q05923 314 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 PPP3CAQ08209 521 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 MGAT2Q10469 447 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 MRPL49Q13405 166 aaKnown RBP3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 ACAP1Q15027 740 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 ANKRD13AQ8IZ07 590 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 CHMP4CQ96CF2 233 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 FAM89AQ96GI7 184 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 PDCD2LQ9BRP1 358 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 ADI1Q9BV57 179 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 GPRC5DQ9NZD1 345 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 RCAN3Q9UKA8 241 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 MRFAP1Q9Y605 127 aa3.4□□□□□ -1.87
AC009541.1-201ENST00000438279 FAM171A2A8MVW0 826 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 GZMKP49863 264 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 ADAM17P78536 824 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 R3HDM1Q15032 1099 aaKnown RBP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 PCBP2Q15366 365 aaKnown RBP eCLIP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 METTL24Q5JXM2 366 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 FKBP15Q5T1M5 1219 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 APBB1IPQ7Z5R6 666 aaPredicted RBP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 ANKRD35Q8N283 1001 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 IL17RAQ96F46 866 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 CEP89Q96ST8 783 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 BCO1Q9HAY6 547 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 TCF7L1Q9HCS4 588 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 TLR9Q9NR96 1032 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 TRPS1Q9UHF7 1281 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 ZBTB21Q9ULJ3 1066 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 TCAF1Q9Y4C2 921 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 TESMINQ9Y4I5 508 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 KRTAP4-8A0A0G2JLE6 195 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 OSMP13725 252 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 C5AR1P21730 350 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 MSX2P35548 267 aaPredicted RBP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 NEK2P51955 445 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 DOK3Q7L591 496 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 CHST13Q8NET6 341 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 OR7D4Q8NG98 312 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 DVL3Q92997 716 aaPredicted RBP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 TEKT5Q96M29 485 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 CDK5RAP1Q96SZ6 601 aaKnown RBP3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 ST6GALNAC2Q9UJ37 374 aa3.39□□□□□ -1.87
AC009541.1-201ENST00000438279 C1QTNF3-AMACRE9PGA6 284 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 CYP27B1O15528 508 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 HOXA3O43365 443 aaPredicted RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 NDUFS2O75306 463 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ENDOD1O94919 500 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ZNF20P17024 532 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ADKP55263 362 aaKnown RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 CCT2P78371 535 aaKnown RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 PTPN21Q16825 1174 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 HTR3DQ70Z44 454 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 PDZD4Q76G19 769 aaPredicted RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 D2HGDHQ8N465 521 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ARL8AQ96BM9 186 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ZNF512Q96ME7 567 aaPredicted RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 CAMKK2Q96RR4 588 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 KLC2Q9H0B6 622 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 TUBD1Q9UJT1 453 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 NCANO14594 1321 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 E2F8A0AVK6 867 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 B8ZZF3 427 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 PRRG2O14669 202 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 AKR1B10O60218 316 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ITGA10O75578 1167 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ECHS1P30084 290 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 CASRP41180 1078 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 RECQLP46063 649 aaPredicted RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 SLC16A1P53985 500 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 PLEKHG6Q3KR16 790 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 C8orf49Q96NF6 230 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 CDC5LQ99459 802 aaKnown RBP3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 SH3BP1Q9Y3L3 701 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 TSC22D4Q9Y3Q8 395 aa3.38□□□□□ -1.87
AC009541.1-201ENST00000438279 ACO1P21399 889 aaKnown RBP3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 HHEXQ03014 270 aa3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 SP140Q13342 867 aa3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 ACAP2Q15057 778 aa3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 CLUL1Q15846 466 aa3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 DCAF17Q5H9S7 520 aaPredicted RBP3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 EFCAB2Q5VUJ9 269 aa3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 NAIF1Q69YI7 327 aaPredicted RBP3.37□□□□□ -1.87
AC009541.1-201ENST00000438279 Q6ZVL8 140 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms