RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 DLL1O00548 723 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 TSPAN1O60635 241 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 ZSCAN20P17040 1043 aaPredicted RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 GTF2F1P35269 517 aaKnown RBP eCLIP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 PRPHP41219 470 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 AFF1P51825 1210 aaKnown RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 CDC42EP1Q00587 391 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 GRIN1Q05586 938 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 MBTD1Q05BQ5 628 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 RILPL1Q5EBL4 403 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 TWF2Q6IBS0 349 aaKnown RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 FAM173BQ6P4H8 233 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 FAM43BQ6ZT52 329 aaPredicted RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 ADGRD2Q7Z7M1 963 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 CDR2LQ86X02 465 aaPredicted RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 EXOC8Q8IYI6 725 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 SNX29Q8TEQ0 813 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 TATDN2Q93075 761 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 P2RX5Q93086 422 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 CPB2Q96IY4 423 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 PNMA5Q96PV4 448 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 NACC1Q96RE7 527 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 C11orf84Q9BUA3 381 aaPredicted RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 PLVAPQ9BX97 442 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 EIF2AQ9BY44 585 aaKnown RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 CHST12Q9NRB3 414 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 FAM105AQ9NUU6 356 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 DDX19AQ9NUU7 478 aaKnown RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
HERPUD2-206ENST00000438224 VWA8A3KMH1 1905 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 VPS37CA5D8V6 355 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 CFAP99D6REC4 459 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 E9PMD0 336 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 LAD1O00515 517 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 ASAP2O43150 1006 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 ZNF623O75123 536 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 EOMESO95936 686 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 ARF4P18085 180 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 CYP11B2P19099 503 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 COL9A1P20849 921 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 SYT1P21579 422 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 MUTP22033 750 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 HYAL1Q12794 435 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 RESTQ13127 1097 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 MAPK7Q13164 816 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 PDIA5Q14554 519 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 MXD4Q14582 209 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 TIGD5Q53EQ6 642 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 CDCA2Q69YH5 1023 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 AGMOQ6ZNB7 445 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 MRPL10Q7Z7H8 261 aaKnown RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 TMEM173Q86WV6 379 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 DAW1Q8N136 415 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 SMG8Q8ND04 991 aaKnown RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 ERMNQ8TAM6 284 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 ATXN2LQ8WWM7 1075 aaKnown RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 CCDC43Q96MW1 224 aaKnown RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 ASB2Q96Q27 587 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 RUSC1Q9BVN2 902 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 INO80BQ9C086 356 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 BHMT2Q9H2M3 363 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 UBE2ZQ9H832 354 aaPredicted RBP9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 DACT1Q9NYF0 836 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 RWDD3Q9Y3V2 267 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
HERPUD2-206ENST00000438224 DOCK6Q96HP0 2047 aa9.46□□□□□ -0.89
HERPUD2-206ENST00000438224 ARHGEF35A5YM69 484 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 VWA3AA6NCI4 1184 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 LRRIQ4A6NIV6 560 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 SNPHO15079 494 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 LINC01565O15544 149 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 FGF18O76093 207 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 BMP1P13497 986 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 LTBRP36941 435 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 MRPS5P82675 430 aaKnown RBP9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 POU5F1BQ06416 359 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 PTPAQ15257 358 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 PTPROQ16827 1216 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 TJAP1Q5JTD0 557 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 HYIQ5T013 277 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 KCNT2Q6UVM3 1135 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 DTHD1Q6ZMT9 781 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 LRRC43Q8N309 656 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 MCPH1Q8NEM0 835 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 BCL7CQ8WUZ0 217 aaPredicted RBP9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 POF1BQ8WVV4 589 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 HLA-CQ95604 372 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 SNX21Q969T3 373 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 NECAB3Q96P71 396 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms