RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SLC1A1P43005 524 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 EIF2B2P49770 351 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 UBE3AQ05086 875 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 PLEKHA8Q96JA3 519 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 HADHAP40939 763 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 MIS18BP1Q6P0N0 1132 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 IYDQ6PHW0 289 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 LVRNQ6Q4G3 990 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 MCRS1Q96EZ8 462 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 HACD3Q9P035 362 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 UBA2Q9UBT2 640 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 COBLO75128 1261 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ARHGAP17Q68EM7 881 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 CYFIP2Q96F07 1278 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TRABDQ9H4I3 376 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 KLHL8Q9P2G9 620 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 LMTK3Q96Q04 1460 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 UBN2Q6ZU65 1347 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 SERPINH1P50454 418 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 PKN2Q16513 984 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 KYNUQ16719 465 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TMED8Q6PL24 325 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 FGD2Q7Z6J4 655 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ANKRD7Q92527 254 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 PSMC3IPQ9P2W1 217 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 FCGR1AP12314 374 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TALDO1P37837 337 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 RECQLP46063 649 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 SERPINB8P50452 374 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 DMPKQ09013 629 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 IFNL3Q8IZI9 196 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ASZ1Q8WWH4 475 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 DCLRE1BQ9H816 532 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 FAM153AQ9UHL3 310 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 E5RI56 91 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 TBXAS1P24557 533 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ROR1Q01973 937 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 CCDC137Q6PK04 289 aaKnown RBP12.18□□□□□ -0.46
PTCH1-209ENST00000437951 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 ABCC4O15439 1325 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 BTBD18B2RXH4 712 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 C5orf58C9J3I9 102 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RCSD1Q6JBY9 416 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 ENOSF1Q7L5Y1 443 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 PPHLN1Q8NEY8 458 aaKnown RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 USE1Q9NZ43 259 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 BTBD7Q9P203 1132 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 LARGE2Q8N3Y3 721 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RBBP8Q99708 897 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 CHN1P15882 459 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 KDSRQ06136 332 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 UGP2Q16851 508 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 IFT43Q96FT9 208 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 KLHL4Q9C0H6 718 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 ANAPC7Q9UJX3 599 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 NSUN2Q08J23 767 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 CYB5D1Q6P9G0 228 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 DDIASQ8IXT1 998 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 NFKBIL1Q9UBC1 381 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 MAD2L2Q9UI95 211 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 GOLGA8SH3BPF8 625 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RNF103O00237 685 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 GCKRQ14397 625 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 NCF4Q15080 339 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 TSC22D1Q15714 1073 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RIN3Q8TB24 985 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 OTULINQ96BN8 352 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 TMEM161AQ9NX61 479 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 FBXL5Q9UKA1 691 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 TIMM10P62072 90 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 GPS1Q13098 491 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 LBRQ14739 615 aaKnown RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RAB42Q8N4Z0 105 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 SLC7A3Q8WY07 619 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms