RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SNF8Q96H20 258 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 MAP2K2P36507 400 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 PDE1CQ14123 709 aaPredicted RBP16.85■□□□□ 0.29
PTPN13-204ENST00000436978 KSR1Q8IVT5 923 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 WDR75Q8IWA0 830 aaKnown RBP16.85■□□□□ 0.29
PTPN13-204ENST00000436978 DYRK4Q9NR20 520 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 SLC1A1P43005 524 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 DRAP1Q14919 205 aaPredicted RBP16.85■□□□□ 0.29
PTPN13-204ENST00000436978 AFDNP55196 1824 aaKnown RBP16.85■□□□□ 0.29
PTPN13-204ENST00000436978 SETSIPP0DME0 302 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 FAM217BQ9NTX9 383 aaPredicted RBP16.85■□□□□ 0.29
PTPN13-204ENST00000436978 PTPRMP28827 1452 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 STK25O00506 426 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 RAD51Q06609 339 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 STILQ15468 1287 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 KCTD17Q8N5Z5 321 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 PDCD6IPQ8WUM4 868 aaKnown RBP16.85■□□□□ 0.29
PTPN13-204ENST00000436978 HINFPQ9BQA5 517 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 TJP2Q9UDY2 1190 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 NFU1Q9UMS0 254 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 CDK17Q00537 523 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 TTC30AQ86WT1 665 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 TBC1D16Q8TBP0 767 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 SBK1Q52WX2 424 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 HHIPL2Q6UWX4 724 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 KCNJ6P48051 423 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 ANGPTL8Q6UXH0 198 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 CCDC138Q96M89 665 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 IL18RAPO95256 599 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 NME3Q13232 169 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 CDC26Q8NHZ8 85 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 EML4Q9HC35 981 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 SPON1Q9HCB6 807 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 A0A1W2PQC6 194 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 ESRRAP11474 423 aaPredicted RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 RPS12P25398 132 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 LAMB3Q13751 1172 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 MICALL2Q8IY33 904 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 YAF2Q8IY57 180 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 FMR1NBQ8N0W7 255 aaPredicted RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 EXT2Q93063 718 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 PARD6BQ9BYG5 372 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 MTIF3Q9H2K0 278 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 SLC38A7Q9NVC3 462 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 MAGEB2O15479 319 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 BTBD8Q5XKL5 378 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 ALKBH8Q96BT7 664 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 MRPL46Q9H2W6 279 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 SNX17Q15036 470 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 FAM102AQ5T9C2 384 aaPredicted RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 TRIM54Q9BYV2 358 aa16.84■□□□□ 0.29
PTPN13-204ENST00000436978 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
PTPN13-204ENST00000436978 TNPO2O14787 897 aaKnown RBP16.83■□□□□ 0.29
PTPN13-204ENST00000436978 CDC27P30260 824 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 ADCY1Q08828 1119 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 SPATA2LQ8IUW3 424 aaPredicted RBP16.83■□□□□ 0.29
PTPN13-204ENST00000436978 OXER1Q8TDS5 423 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 APOBEC2Q9Y235 224 aaKnown RBP16.83■□□□□ 0.29
PTPN13-204ENST00000436978 A8MXQ7 604 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 DGAT1O75907 488 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 CPB1P15086 417 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 TRIM55Q9BYV6 548 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 FAM196BA6NMK8 535 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 PDXKO00764 312 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 PSMD3O43242 534 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 ENTPD3O75355 529 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 LIG3P49916 1009 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 HMGCS2P54868 508 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 TMPRSS15P98073 1019 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 SREBF2Q12772 1141 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 IER5Q5VY09 327 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 KIFC3Q9BVG8 833 aa16.83■□□□□ 0.29
PTPN13-204ENST00000436978 RTN2O75298 545 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 GRIK1P39086 918 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 RFC5P40937 340 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 STAT5BP51692 787 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 TTC23LQ6PF05 361 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 N4BP2L2Q92802 583 aaPredicted RBP16.83■□□□□ 0.28
PTPN13-204ENST00000436978 NOVA2Q9UNW9 492 aaKnown RBP16.83■□□□□ 0.28
PTPN13-204ENST00000436978 EMSYQ7Z589 1322 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 RASA4BC9J798 803 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 RASA4O43374 803 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 PYGBP11216 843 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 CASP8Q14790 479 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 SYDE1Q6ZW31 735 aaPredicted RBP16.83■□□□□ 0.28
PTPN13-204ENST00000436978 APPL2Q8NEU8 664 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 ZFYVE28Q9HCC9 887 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 L3MBTL1Q9Y468 752 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 TBX3O15119 743 aa16.83■□□□□ 0.28
PTPN13-204ENST00000436978 SEC31AO94979 1220 aaKnown RBP16.83■□□□□ 0.28
PTPN13-204ENST00000436978 C16orf86Q6ZW13 317 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms