RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 FBXO22Q8NEZ5 403 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 DDX12PQ92771 950 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 LPPQ93052 612 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 FIZ1Q96SL8 496 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 GAS2L1Q99501 681 aaPredicted RBP20.23■□□□□ 0.83
HLA-F-220ENST00000434407 PLVAPQ9BX97 442 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 PDZD7Q9H5P4 517 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 CWH43Q9H720 699 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 PARVGQ9HBI0 331 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 BRWD1Q9NSI6 2320 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 KBTBD4Q9NVX7 518 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 CIZ1Q9ULV3 898 aaPredicted RBP20.23■□□□□ 0.83
HLA-F-220ENST00000434407 IPPQ9Y573 584 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 H3BNC9 293 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 N4BP3O15049 544 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 INPPL1O15357 1258 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 OFD1O75665 1012 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 MAPTP10636 758 aaKnown RBP20.22■□□□□ 0.83
HLA-F-220ENST00000434407 SCP2P22307 547 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 CMA1P23946 247 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 IQUBQ8NA54 791 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 HELQQ8TDG4 1101 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 TYW1Q9NV66 732 aaKnown RBP20.22■□□□□ 0.83
HLA-F-220ENST00000434407 MTUS1Q9ULD2 1270 aa20.22■□□□□ 0.83
HLA-F-220ENST00000434407 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
HLA-F-220ENST00000434407 ATG2AQ2TAZ0 1938 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 H0YCG3 227 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 FAM13AO94988 1023 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 FOSL2P15408 326 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 CDR2LQ86X02 465 aaPredicted RBP20.21■□□□□ 0.83
HLA-F-220ENST00000434407 ABI1Q8IZP0 508 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 LRRC43Q8N309 656 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 GDPD5Q8WTR4 605 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 P2RX5Q93086 422 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 ACO2Q99798 780 aaKnown RBP20.21■□□□□ 0.83
HLA-F-220ENST00000434407 TNMDQ9H2S6 317 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 PTPRHQ9HD43 1115 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 UBN1Q9NPG3 1134 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 FAM13BQ9NYF5 915 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 LMCD1Q9NZU5 365 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 HCSTQ9UBK5 93 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 TNFSF13BQ9Y275 285 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 ZMYM2Q9UBW7 1377 aa20.21■□□□□ 0.83
HLA-F-220ENST00000434407 FAM237AA0A1B0GTK4 181 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 POLR2DO15514 142 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 TBCAO75347 108 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 NPTXRO95502 500 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 KRT18P05783 430 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 CTNNB1P35222 781 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 ANP32AP39687 249 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 LONRF3Q496Y0 759 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 ATF7IP2Q5U623 682 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 EEF1DP3Q658K8 133 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 CNNM4Q6P4Q7 775 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 GLB1LQ6UWU2 654 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 DYMQ7RTS9 669 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 MYCT1Q8N699 235 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 DHX58Q96C10 678 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 MRPL9Q9BYD2 267 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 MRPL4Q9BYD3 311 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 NXF3Q9H4D5 531 aaKnown RBP20.2■□□□□ 0.82
HLA-F-220ENST00000434407 ST6GALNAC4Q9H4F1 302 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 RSAD1Q9HA92 442 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 MAGEF1Q9HAY2 307 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 KCNH3Q9ULD8 1083 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 HPSEQ9Y251 543 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 MTCH2Q9Y6C9 303 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 CITO14578 2027 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 PLXNA4Q9HCM2 1894 aa20.2■□□□□ 0.82
HLA-F-220ENST00000434407 ABLIM1O14639 778 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 TRAK2O60296 914 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 ITGA4P13612 1032 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 LIG1P18858 919 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 PROZP22891 400 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 DCAF4L1Q3SXM0 396 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 NOMO2Q5JPE7 1267 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 HAUS6Q7Z4H7 955 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 PYM1Q9BRP8 204 aaKnown RBP20.19■□□□□ 0.82
HLA-F-220ENST00000434407 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-220ENST00000434407 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-220ENST00000434407 SEL1LQ9UBV2 794 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 GIT1Q9Y2X7 761 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 HES2Q9Y543 173 aa20.19■□□□□ 0.82
HLA-F-220ENST00000434407 A0A1W2PQ27 194 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 A0A1W2PQ64 194 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 A0A1W2PQD8 194 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 LAG3P18627 525 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 AFF1P51825 1210 aaKnown RBP20.18■□□□□ 0.82
HLA-F-220ENST00000434407 GTF2BQ00403 316 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 GPM6BQ13491 265 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 COLGALT1Q8NBJ5 622 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 SLC17A8Q8NDX2 589 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 ADPGKQ9BRR6 497 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 TARS2Q9BW92 718 aaKnown RBP20.18■□□□□ 0.82
HLA-F-220ENST00000434407 STRA6Q9BX79 667 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 TRIM9Q9C026 710 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 LRRC27Q9C0I9 530 aa20.18■□□□□ 0.82
HLA-F-220ENST00000434407 TBC1D13Q9NVG8 400 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms