RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 IFT88Q13099 833 aa20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 STYK1Q6J9G0 422 aa20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 C6orf89Q6UWU4 347 aa20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 YTHDF3Q7Z739 585 aaKnown RBP20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 KIRREL3Q8IZU9 778 aa20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 PRELID2Q8N945 189 aa20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 FBXO25Q8TCJ0 367 aa20.28■□□□□ 0.84
BLOC1S3-201ENST00000433642 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 ATMINO43313 823 aaPredicted RBP20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 TBC1D10BQ4KMP7 808 aaPredicted RBP20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 UBAP2Q5T6F2 1119 aaKnown RBP20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 C11orf63Q6NUN7 778 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 MICALCLQ6ZW33 695 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 C7orf43Q8WVR3 580 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 RAPGEF5Q92565 580 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 CABS1Q96KC9 395 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 LARSQ9P2J5 1176 aaKnown RBP20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 LOXHD1Q8IVV2 1947 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 FAM187AA6NFU0 413 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 CAND2O75155 1236 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 RARRES1P49788 294 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 IFFO1Q0D2I5 559 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 SPP2Q13103 211 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 TTC27Q6P3X3 843 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 TLCD1Q96CP7 247 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 ZSWIM1Q9BR11 485 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 GRHL1Q9NZI5 618 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 HSPBP1Q9NZL4 362 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 DDX20Q9UHI6 824 aaKnown RBP20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 CNTNAP1P78357 1384 aa20.27■□□□□ 0.84
BLOC1S3-201ENST00000433642 FSBPO95073 299 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 COMTP21964 271 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 GPC5P78333 572 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 DHX34Q14147 1143 aaKnown RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 PPP2R5EQ16537 467 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 MIGA2Q7L4E1 593 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 NOP9Q86U38 636 aaKnown RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 MDM1Q8TC05 714 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 PSMD1Q99460 953 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 TMEM206Q9H813 350 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 P4HBP07237 508 aaKnown RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 PAEPP09466 180 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 PEX5P50542 639 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 HSD17B4P51659 736 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 ACTN3Q08043 901 aaPredicted RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 MESDQ14696 234 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 RNF187Q5TA31 235 aaPredicted RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 EPS8L1Q8TE68 723 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 RNF25Q96BH1 459 aaPredicted RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 ACCSQ96QU6 501 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 ZNF70Q9UC06 446 aaPredicted RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 NOCTQ9UK39 431 aaKnown RBP20.26■□□□□ 0.83
BLOC1S3-201ENST00000433642 TCRBV7S2A1N4TA0A589 114 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 NFIBO00712 420 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 PHF2O75151 1096 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 TCEAL1Q15170 157 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 TRMT1LQ7Z2T5 733 aaKnown RBP20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 XXYLT1Q8NBI6 393 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 NEK9Q8TD19 979 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 FAM151AQ8WW52 585 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 KREMEN1Q96MU8 473 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 GPRC5CQ9NQ84 441 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 TMOD2Q9NZR1 351 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 MCM8Q9UJA3 840 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 ZNF536O15090 1300 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 GOLGA8IPA6NC78 632 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 GOLGA8JA6NMD2 632 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 MIF4GDA9UHW6 222 aaKnown RBP20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 ADRB2P07550 413 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 PLS3P13797 630 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 RPL21P46778 160 aaKnown RBP20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 PMS2P54278 862 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 NEDD9Q14511 834 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 SPDYCQ5MJ68 293 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 C12orf56Q8IXR9 622 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 BTBD6Q96KE9 485 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 PABPC3Q9H361 631 aaKnown RBP20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 GGA2Q9UJY4 613 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 PFASO15067 1338 aa20.25■□□□□ 0.83
BLOC1S3-201ENST00000433642 P4HA2O15460 535 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 C21orf2O43822 256 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 RTN2O75298 545 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 PYGMP11217 842 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 CTNNA2P26232 953 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 DRG2P55039 364 aaKnown RBP20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 CETN1Q12798 172 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 HAUS6Q7Z4H7 955 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 FAM160B2Q86V87 743 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 SLC47A2Q86VL8 602 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 UBL4BQ8N7F7 174 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 PCDHA3Q9Y5H8 950 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 RPTORQ8N122 1335 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 CYP26A1O43174 497 aa20.24■□□□□ 0.83
BLOC1S3-201ENST00000433642 PLA2G6O60733 806 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms