RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 C19orf54Q5BKX5 351 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 OVCH2Q7RTZ1 564 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 CERS3Q8IU89 383 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 REXO1L1PQ8IX06 675 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 FAM156AQ8NDB6 213 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP54-206ENST00000433394 PPP1R35Q8TAP8 253 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 FDXACB1Q9BRP7 624 aaPredicted RBP7.44□□□□□ -1.22
USP54-206ENST00000433394 B3GNT5Q9BYG0 378 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 NTMQ9P121 344 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 PCDHA13Q9Y5I0 950 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 A0A0A6YYK5 440 aaPredicted RBP7.43□□□□□ -1.22
USP54-206ENST00000433394 LOC102724159A0A0B4J2E5 919 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 A0A1W2PR48 441 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
USP54-206ENST00000433394 RFXAPO00287 272 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 APAF1O14727 1248 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 PMM2O15305 246 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
USP54-206ENST00000433394 EDNRBP24530 442 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 SMARCA1P28370 1054 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 STAT5BP51692 787 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 IFIT5Q13325 482 aaKnown RBP7.43□□□□□ -1.22
USP54-206ENST00000433394 RAB39AQ14964 217 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 PWP2Q15269 919 aaKnown RBP7.43□□□□□ -1.22
USP54-206ENST00000433394 KRT40Q6A162 431 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 PDZD4Q76G19 769 aaPredicted RBP7.43□□□□□ -1.22
USP54-206ENST00000433394 TAS1R1Q7RTX1 841 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 KAT5Q92993 513 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 NOX5Q96PH1 765 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 SOX7Q9BT81 388 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 SGPP1Q9BX95 441 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 CARD11Q9BXL7 1154 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 TMEM168Q9H0V1 697 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 NUP62CLQ9H1M0 184 aa7.43□□□□□ -1.22
USP54-206ENST00000433394 CFAP69A5D8W1 941 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 NRP1O14786 923 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 GASTP01350 101 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 ALDH2P05091 517 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 GAAP10253 952 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 HNRNPLP14866 589 aaKnown RBP eCLIP7.42□□□□□ -1.223e-8■■■■□ 26.7
USP54-206ENST00000433394 RPL13P26373 211 aaKnown RBP7.42□□□□□ -1.22
USP54-206ENST00000433394 AK2P54819 239 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 GJA9P57773 515 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 TOP3AQ13472 1001 aaPredicted RBP7.42□□□□□ -1.22
USP54-206ENST00000433394 IL10RAQ13651 578 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 MORC3Q14149 939 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 ZMAT1Q5H9K5 638 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 RNF220Q5VTB9 566 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 NPNTQ6UXI9 565 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 KLHDC4Q8TBB5 520 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 CLPTM1LQ96KA5 538 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 MYD88Q99836 296 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 SYT3Q9BQG1 590 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 SENP6Q9GZR1 1112 aaPredicted RBP7.42□□□□□ -1.22
USP54-206ENST00000433394 BCO1Q9HAY6 547 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 LANCL2Q9NS86 450 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 TMEM140Q9NV12 185 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 NR2E3Q9Y5X4 410 aa7.42□□□□□ -1.22
USP54-206ENST00000433394 H3BUI4 141 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 MLLT6P55198 1093 aaPredicted RBP7.41□□□□□ -1.22
USP54-206ENST00000433394 PPP3CAQ08209 521 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 FGL2Q14314 439 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 UBE3CQ15386 1083 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 CNKSR3Q6P9H4 555 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 PQLC1Q8N2U9 271 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 PLA2G15Q8NCC3 412 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 NKD2Q969F2 451 aaPredicted RBP7.41□□□□□ -1.22
USP54-206ENST00000433394 STRBPQ96SI9 672 aaKnown RBP7.41□□□□□ -1.22
USP54-206ENST00000433394 NLRC4Q9NPP4 1024 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 LMBRD1Q9NUN5 540 aa7.41□□□□□ -1.22
USP54-206ENST00000433394 FEZ2Q9UHY8 353 aaPredicted RBP7.41□□□□□ -1.22
USP54-206ENST00000433394 TEX33O43247 280 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 TMEM127O75204 238 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 ALDH1A2O94788 518 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 GYPEP15421 78 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 PEX2P28328 305 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 CRHR1P34998 444 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 MAP2K6P52564 334 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 DUSP2Q05923 314 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 USP10Q14694 798 aaKnown RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 ZRSR2Q15696 482 aaKnown RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 MST1LQ2TV78 715 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 MAEAQ7L5Y9 396 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 FAM186BQ8IYM0 893 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 OR7D4Q8NG98 312 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 CCHCR1Q8TD31 782 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 LRTOMTQ8WZ04 291 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 SLC7A6OSQ96CW6 309 aaPredicted RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 TMX3Q96JJ7 454 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 PWWP2AQ96N64 755 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 CDC5LQ99459 802 aaKnown RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 LRRC27Q9C0I9 530 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 SARS2Q9NP81 518 aaKnown RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 TLR9Q9NR96 1032 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 CHST12Q9NRB3 414 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 GNL3LQ9NVN8 582 aaKnown RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 CALCOCO1Q9P1Z2 691 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 PUF60Q9UHX1 559 aaKnown RBP7.4□□□□□ -1.22
USP54-206ENST00000433394 PHTF1Q9UMS5 762 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms