RNA–Protein interactions for RNA: ENST00000433241.5

UBE2F-208, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 2

Gene UBE2F, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-208	ENST00000433241	ZSCAN22	P10073	491 aa	Predicted RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	ITGA4	P13612	1032 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	PLCG1	P19174	1290 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	PPM1A	P35813	382 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	BCAR1	P56945	870 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	MRPS5	P82675	430 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	TFF2	Q03403	129 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	CEBPZ	Q03701	1054 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	PRPF4B	Q13523	1007 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	KARS	Q15046	597 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	CTC1	Q2NKJ3	1217 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	TJAP1	Q5JTD0	557 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	SPECC1	Q5M775	1068 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	USP49	Q70CQ1	688 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	TAS1R3	Q7RTX0	852 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	THNSL1	Q8IYQ7	743 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	SLC39A11	Q8N1S5	342 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	MRPS27	Q92552	414 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	RAD54L	Q92698	747 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	KCNN1	Q92952	543 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	PABPC5	Q96DU9	382 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	CLIC6	Q96NY7	704 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	NXF3	Q9H4D5	531 aa	Known RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	PDZD7	Q9H5P4	517 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	TMEM134	Q9H6X4	195 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	DAXX	Q9UER7	740 aa	Predicted RBP	11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	INPP5F	Q9Y2H2	1132 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	USP20	Q9Y2K6	914 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	GIT1	Q9Y2X7	761 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	HES2	Q9Y543	173 aa		11.13	□□□□□ -0.63
UBE2F-208	ENST00000433241	PHLPP2	Q6ZVD8	1323 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	ARL5C	A6NH57	179 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	SFI1	A8K8P3	1242 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	FSCN2	O14926	492 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	N4BP3	O15049	544 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	PPP6R2	O75170	966 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	DDHD2	O94830	711 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	NPTXR	O95502	500 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	F13A1	P00488	732 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	SSB	P05455	408 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	HSP90AA1	P07900	732 aa	Known RBP	11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	GALT	P07902	379 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	PLS3	P13797	630 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	ERVFC1	P60507	584 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	HYAL1	Q12794	435 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	DMP1	Q13316	513 aa	Predicted RBP	11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	PKP1	Q13835	747 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	NT5DC1	Q5TFE4	455 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	EEF1DP3	Q658K8	133 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	ADGRD2	Q7Z7M1	963 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	ZNF280B	Q86YH2	543 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	LINC00301	Q8NCQ3	95 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	GSTCD	Q8NEC7	633 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	URGCP	Q8TCY9	931 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	SPIRE2	Q8WWL2	714 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	SYMPK	Q92797	1274 aa	Known RBP	11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	GAD1	Q99259	594 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	TMEM175	Q9BSA9	504 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	TRIM6	Q9C030	488 aa	Predicted RBP	11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	UBE2Z	Q9H832	354 aa	Predicted RBP	11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	KMT5A	Q9NQR1	393 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	TLR9	Q9NR96	1032 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	MIOS	Q9NXC5	875 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	SPG21	Q9NZD8	308 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	KANSL3	Q9P2N6	904 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	DNAJB4	Q9UDY4	337 aa		11.12	□□□□□ -0.63
UBE2F-208	ENST00000433241	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	CARNS1	A5YM72	827 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	CCDC169	A6NNP5	214 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	NT5C1B-RDH14	C9J2C7	533 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241		K7ERI5	159 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	NCK2	O43639	380 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	YEATS4	O95619	227 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	POMC	P01189	267 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	BMP1	P13497	986 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	DDIT3	P35638	169 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	LTBR	P36941	435 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	MLH1	P40692	756 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	ALDH7A1	P49419	539 aa	Known RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	KCNQ1	P51787	676 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	ZNF131	P52739	623 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	KRT17	Q04695	432 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	DSC1	Q08554	894 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	RAD51AP2	Q09MP3	1159 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	MCM6	Q14566	821 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	AAK1	Q2M2I8	961 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	PDE12	Q6L8Q7	609 aa	Known RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	GPBP1	Q86WP2	473 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	TMEM173	Q86WV6	379 aa	Predicted RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	HACE1	Q8IYU2	909 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	KRI1	Q8N9T8	703 aa	Known RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	SPRYD3	Q8NCJ5	442 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	TMEM161B	Q8NDZ6	487 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	LARP4B	Q92615	738 aa	Known RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	IGSF21	Q96ID5	467 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	ZFP42	Q96MM3	310 aa		11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	ZNF396	Q96N95	335 aa	Predicted RBP	11.11	□□□□□ -0.63
UBE2F-208	ENST00000433241	REEP2	Q9BRK0	252 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms