RNA–Protein interactions for RNA: ENST00000432289.5

CCDC196-204, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-204ENST00000432289 LCNL1Q6ZST4 164 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 HS2ST1Q7LGA3 356 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 SIAH1Q8IUQ4 282 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 REXO1Q8N1G1 1221 aaKnown RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 LRRC47Q8N1G4 583 aaKnown RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 SRBD1Q8N5C6 995 aaKnown RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 ANKS4BQ8N8V4 417 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 ZSCAN18Q8TBC5 510 aaPredicted RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 CCDC12Q8WUD4 166 aaPredicted RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 RRP36Q96EU6 259 aaKnown RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 SPZ1Q9BXG8 430 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 ZNF341Q9BYN7 854 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 DEFB129Q9H1M3 183 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 SLC6A17Q9H1V8 727 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 MAD2L2Q9UI95 211 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 YBX2Q9Y2T7 364 aaKnown RBP8.18□□□□□ -1.1
CCDC196-204ENST00000432289 OTOFQ9HC10 1997 aa8.18□□□□□ -1.1
CCDC196-204ENST00000432289 PARP14Q460N5 1801 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 PTPRFP10586 1907 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 GOLGA6L4A6NEF3 574 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 hCG_1984214I3L0E3 225 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 ETV2O00321 342 aaPredicted RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 FIBPO43427 364 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 DDNO94850 711 aaPredicted RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 MMP1P03956 469 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 PDHBP11177 359 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 EPS15P42566 896 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 KIF23Q02241 960 aaPredicted RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 RAD51AP2Q09MP3 1159 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 PFKFB3Q16875 520 aaPredicted RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 SLFN13Q68D06 897 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 USP48Q86UV5 1035 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 ZNF713Q8N859 430 aaPredicted RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 DCPSQ96C86 337 aaKnown RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 SHISA4Q96DD7 197 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 SPATA32Q96LK8 384 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 AIFM3Q96NN9 605 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 ASCC2Q9H1I8 757 aaPredicted RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 SH3GLB2Q9NR46 395 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 GGA3Q9NZ52 723 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 UBP1Q9NZI7 540 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 ZBTB21Q9ULJ3 1066 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 CNPY2Q9Y2B0 182 aa8.17□□□□□ -1.1
CCDC196-204ENST00000432289 DDX49Q9Y6V7 483 aaKnown RBP8.17□□□□□ -1.1
CCDC196-204ENST00000432289 IQCA1LA6NCM1 817 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 NOTOA8MTQ0 251 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 CTNND1O60716 968 aaKnown RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 ELP1O95163 1332 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 SNHG28P0DPA3 235 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 POLR2BP30876 1174 aaKnown RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 KRT2P35908 639 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 CCNFP41002 786 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 SLC1A4P43007 532 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 NLRP5P59047 1200 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 CHMP4BP1P59074 171 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 ZNF543Q08ER8 600 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 IKQ13123 557 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 OTUD7BQ6GQQ9 843 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 GALNT17Q6IS24 598 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 ATG14Q6ZNE5 492 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 USP50Q70EL3 339 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 DIS3L2Q8IYB7 885 aaKnown RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 GMCL1P1Q8NEA9 526 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 PIBF1Q8WXW3 757 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 ATG4CQ96DT6 458 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 TEPSINQ96N21 525 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 FOXP1Q9H334 677 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-204ENST00000432289 LMBRD1Q9NUN5 540 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 PGAP2Q9UHJ9 254 aa8.16□□□□□ -1.1
CCDC196-204ENST00000432289 MYH7BA7E2Y1 1941 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 COL11A1P12107 1806 aaPredicted RBP8.15□□□□□ -1.1
CCDC196-204ENST00000432289 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.1
CCDC196-204ENST00000432289 ASTN2O75129 1339 aaPredicted RBP8.15□□□□□ -1.1
CCDC196-204ENST00000432289 hCG_1642624A0A1W2PR95 340 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 GLTPD2A6NH11 291 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 F5H6K3 240 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 GOLGA8HP0CJ92 632 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 U2AF2P26368 475 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCDC196-204ENST00000432289 GUCY1A2P33402 732 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 NAPAP54920 295 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 UBE2HP62256 183 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 CLCQ05315 142 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 KLRC3Q07444 240 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 TRAF1Q13077 416 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 SF3A1Q15459 793 aaKnown RBP8.15□□□□□ -1.1
CCDC196-204ENST00000432289 KCNA10Q16322 511 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 KLHL40Q2TBA0 621 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 SEZ6Q53EL9 994 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 LDLRAD1Q5T700 205 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 HEATR3Q7Z4Q2 680 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 TMC3Q7Z5M5 1100 aa8.15□□□□□ -1.1
CCDC196-204ENST00000432289 HOMER1Q86YM7 354 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms