RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 OTUD6AQ7L8S5 288 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 MIER3Q7Z3K6 550 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 CABP7Q86V35 215 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 URGCPQ8TCY9 931 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 HELQQ8TDG4 1101 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 TCP11Q8WWU5 503 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 DDX12PQ92771 950 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 ZNF274Q96GC6 653 aaPredicted RBP9.29□□□□□ -0.92
CDH13-203ENST00000431540 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 PLEKHA4Q9H4M7 779 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 NRDE2Q9H7Z3 1164 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 MRPL17Q9NRX2 175 aaKnown RBP9.29□□□□□ -0.92
CDH13-203ENST00000431540 TBC1D13Q9NVG8 400 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
CDH13-203ENST00000431540 DBR1Q9UK59 544 aaKnown RBP9.29□□□□□ -0.92
CDH13-203ENST00000431540 PCDHA4Q9UN74 947 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 PCDHGC5Q9Y5F6 944 aa9.29□□□□□ -0.92
CDH13-203ENST00000431540 M0R2N6 131 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 EDIL3O43854 480 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 CDC45O75419 566 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 NR1I2O75469 434 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 DEXIO95424 95 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 BRD1O95696 1058 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 EFEMP2O95967 443 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 XRCC6P12956 609 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDH13-203ENST00000431540 NCLP19338 710 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 AOC1P19801 751 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 QARSP47897 775 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 CLCN4P51793 760 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 VCPP55072 806 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 CREMQ03060 361 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 RNASELQ05823 741 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 PPP2R5CQ13362 524 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 MXD4Q14582 209 aaPredicted RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 LETM2Q2VYF4 491 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 TWF2Q6IBS0 349 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 CPLX2Q6PUV4 134 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 Q6ZUG5 572 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 CCDC149Q6ZUS6 474 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 CENPQQ7L2Z9 268 aaPredicted RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 C4orf19Q8IY42 314 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 LRRC71Q8N4P6 559 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 SLC7A3Q8WY07 619 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 NKD2Q969F2 451 aaPredicted RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 SCLT1Q96NL6 688 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 FAM193BQ96PV7 902 aaPredicted RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 NFKBIZQ9BYH8 718 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 DHX33Q9H6R0 707 aaKnown RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 IFT122Q9HBG6 1241 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 RXFP1Q9HBX9 757 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDH13-203ENST00000431540 AGPAT5Q9NUQ2 364 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDH13-203ENST00000431540 SUCLA2Q9P2R7 463 aaPredicted RBP9.28□□□□□ -0.92
CDH13-203ENST00000431540 LIMD1Q9UGP4 676 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 DUSP12Q9UNI6 340 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 FAN1Q9Y2M0 1017 aa9.28□□□□□ -0.92
CDH13-203ENST00000431540 CACNA1IQ9P0X4 2223 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 ARID2Q68CP9 1835 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 A0A087WZ62 844 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.27□□□□□ -0.93
CDH13-203ENST00000431540 PRR23AA6NEV1 266 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 MAP3K7O43318 606 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 REC8O95072 547 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 SOD2P04179 222 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 ADH1AP07327 375 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 PDIA3P30101 505 aaKnown RBP9.27□□□□□ -0.93
CDH13-203ENST00000431540 NLRP5P59047 1200 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 RBM10P98175 930 aaKnown RBP9.27□□□□□ -0.93
CDH13-203ENST00000431540 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
CDH13-203ENST00000431540 PTPN14Q15678 1187 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 PHLDB3Q6NSJ2 640 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 LLGL2Q6P1M3 1020 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 CATSPER4Q7RTX7 472 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 KRT25Q7Z3Z0 450 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 HACE1Q8IYU2 909 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 RNF168Q8IYW5 571 aaPredicted RBP9.27□□□□□ -0.93
CDH13-203ENST00000431540 BLIDQ8IZY5 108 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 TBCKQ8TEA7 893 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 BRF1Q92994 677 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 KLHL5Q96PQ7 755 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 FDXACB1Q9BRP7 624 aaPredicted RBP9.27□□□□□ -0.93
CDH13-203ENST00000431540 TM6SF1Q9BZW5 370 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 UNC45AQ9H3U1 944 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 MFSD1Q9H3U5 465 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 ZDHHC7Q9NXF8 308 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 FNIP2Q9P278 1114 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 EPS15L1Q9UBC2 864 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 PCDHB2Q9Y5E7 798 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 WDR87Q6ZQQ6 2873 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 MIA3Q5JRA6 1907 aa9.27□□□□□ -0.93
CDH13-203ENST00000431540 GVINP1Q7Z2Y8 2422 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 VPS13AQ96RL7 3174 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 DDX11L8A8MPP1 907 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 H0Y858 1186 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 ZC3H11AO75152 810 aaKnown RBP eCLIP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms