RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 ACSF2Q96CM8 615 aaPredicted RBP17.05■□□□□ 0.32
RPL28-204ENST00000431533 PHOX2BQ99453 314 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 POMKQ9H5K3 350 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 C2CD4DB7Z1M9 353 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 NT5C1B-RDH14C9J2C7 533 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 GALR2O43603 387 aaPredicted RBP17.04■□□□□ 0.32
RPL28-204ENST00000431533 SPATA31C1P0DKV0 1188 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 CTSAP10619 480 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 PTGDRQ13258 359 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 LONRF3Q496Y0 759 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
RPL28-204ENST00000431533 KIAA1841Q6NSI8 718 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 ELMSAN1Q6PJG2 1045 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 CABP7Q86V35 215 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 IGSF21Q96ID5 467 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 EMILIN2Q9BXX0 1053 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 IFT122Q9HBG6 1241 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 FAM105AQ9NUU6 356 aa17.04■□□□□ 0.32
RPL28-204ENST00000431533 ZNF623O75123 536 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 DGAT1O75907 488 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
RPL28-204ENST00000431533 NOMO2Q5JPE7 1267 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 LARP1BQ659C4 914 aaKnown RBP17.03■□□□□ 0.32
RPL28-204ENST00000431533 C4orf32Q8N8J7 132 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
RPL28-204ENST00000431533 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 KANSL3Q9P2N6 904 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
RPL28-204ENST00000431533 ASAP2O43150 1006 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
RPL28-204ENST00000431533 TFDP1Q14186 410 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 OTOP3Q7RTS5 596 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 SRGAP1Q7Z6B7 1085 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 ASAP3Q8TDY4 903 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 LPPQ93052 612 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 NACC1Q96RE7 527 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 POLR3CQ9BUI4 534 aaPredicted RBP17.02■□□□□ 0.32
RPL28-204ENST00000431533 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
RPL28-204ENST00000431533 SFXN1Q9H9B4 322 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 GPRC5CQ9NQ84 441 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 FAM86C1Q9NVL1 165 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 DPP7Q9UHL4 492 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 SSX2IPQ9Y2D8 614 aa17.02■□□□□ 0.32
RPL28-204ENST00000431533 CACNA1HO95180 2353 aa17.02■□□□□ 0.31
RPL28-204ENST00000431533 CNTNAP2Q9UHC6 1331 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 TRIOO75962 3097 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
RPL28-204ENST00000431533 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 PROB1E7EW31 1015 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 H0Y858 1186 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 ERLIN2O94905 339 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 BRD1O95696 1058 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 ALDH2P05091 517 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 GALTP07902 379 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 RPA1P27694 616 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 CLCN5P51795 746 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 CAPSQ13938 189 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
RPL28-204ENST00000431533 RILPL1Q5EBL4 403 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 ASTLQ6HA08 431 aaPredicted RBP17.01■□□□□ 0.31
RPL28-204ENST00000431533 CCDC149Q6ZUS6 474 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 RAB34Q9BZG1 259 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
RPL28-204ENST00000431533 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 AGPAT5Q9NUQ2 364 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 LIMD1Q9UGP4 676 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 INPP5FQ9Y2H2 1132 aa17.01■□□□□ 0.31
RPL28-204ENST00000431533 MYO10Q9HD67 2058 aa17■□□□□ 0.31
RPL28-204ENST00000431533 PP2D1A8MPX8 630 aa17■□□□□ 0.31
RPL28-204ENST00000431533 PDGFBP01127 241 aaPredicted RBP17■□□□□ 0.31
RPL28-204ENST00000431533 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
RPL28-204ENST00000431533 GLRA2P23416 452 aa17■□□□□ 0.31
RPL28-204ENST00000431533 KLRC2P26717 231 aa17■□□□□ 0.31
RPL28-204ENST00000431533 ARL2P36404 184 aa17■□□□□ 0.31
RPL28-204ENST00000431533 ECM1Q16610 540 aa17■□□□□ 0.31
RPL28-204ENST00000431533 CNNM3Q8NE01 707 aa17■□□□□ 0.31
RPL28-204ENST00000431533 SNX27Q96L92 541 aa17■□□□□ 0.31
RPL28-204ENST00000431533 TMEM175Q9BSA9 504 aa17■□□□□ 0.31
RPL28-204ENST00000431533 GBP3Q9H0R5 595 aa17■□□□□ 0.31
RPL28-204ENST00000431533 UBN1Q9NPG3 1134 aa17■□□□□ 0.31
RPL28-204ENST00000431533 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
RPL28-204ENST00000431533 LRRIQ4A6NIV6 560 aa16.99■□□□□ 0.31
RPL28-204ENST00000431533 OFD1O75665 1012 aa16.99■□□□□ 0.31
RPL28-204ENST00000431533 EPCAMP16422 314 aa16.99■□□□□ 0.31
RPL28-204ENST00000431533 PTENP60484 403 aa16.99■□□□□ 0.31
RPL28-204ENST00000431533 FOXK2Q01167 660 aa16.99■□□□□ 0.31
RPL28-204ENST00000431533 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
RPL28-204ENST00000431533 CUL4AQ13619 759 aa16.99■□□□□ 0.31
RPL28-204ENST00000431533 PCBP1Q15365 356 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■□□□ 13.9
RPL28-204ENST00000431533 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms