RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 THNSL2Q86YJ6 484 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 CMTM4Q8IZR5 234 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 CISD2Q8N5K1 135 aaKnown RBP2.96□□□□□ -1.94
CDC40-204ENST00000431461 CPT1CQ8TCG5 803 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 ST8SIA2Q92186 375 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 C16orf92Q96LL3 132 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 CLUHP3Q96NS8 147 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 TARS2Q9BW92 718 aaKnown RBP2.96□□□□□ -1.94
CDC40-204ENST00000431461 WNT8AQ9H1J5 351 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 CYP4F11Q9HBI6 524 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 KCNG1Q9UIX4 513 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 RCAN3Q9UKA8 241 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 SORCS3Q9UPU3 1222 aa2.96□□□□□ -1.94
CDC40-204ENST00000431461 A0A087X0B3 334 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 PTPDC1A2A3K4 754 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 MYADML2A6NDP7 307 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 M0R2C6 588 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 TRIM24O15164 1050 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 DAPK3O43293 454 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 LPXNO60711 386 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 RECQL4O94761 1208 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 PRLP01236 227 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 HOXB6P17509 224 aaKnown RBP2.95□□□□□ -1.94
CDC40-204ENST00000431461 KCNA6P17658 529 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 LAG3P18627 525 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 SDSP20132 328 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 CD40P25942 277 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 PLA2G5P39877 138 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 KIR2DL3P43628 341 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 MECP2P51608 486 aaKnown RBP2.95□□□□□ -1.94
CDC40-204ENST00000431461 SESN3P58005 492 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 IL2P60568 153 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 PHC1P78364 1004 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 IRF9Q00978 393 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 ROM1Q03395 351 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 SPIDRQ14159 915 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 LRRC32Q14392 662 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 EPHA7Q15375 998 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 TIGD2Q4W5G0 525 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 FBXO42Q6P3S6 717 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 FGD2Q7Z6J4 655 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 CXorf67Q86X51 503 aaPredicted RBP2.95□□□□□ -1.94
CDC40-204ENST00000431461 SPATS2Q86XZ4 545 aaKnown RBP2.95□□□□□ -1.94
CDC40-204ENST00000431461 OR5AN1Q8NGI8 311 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 RSAD2Q8WXG1 361 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 SSH1Q8WYL5 1049 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 ANKS1AQ92625 1134 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 ERCC4Q92889 916 aaPredicted RBP2.95□□□□□ -1.94
CDC40-204ENST00000431461 MYEOVQ96EZ4 313 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 PAWRQ96IZ0 340 aaKnown RBP2.95□□□□□ -1.94
CDC40-204ENST00000431461 MAML3Q96JK9 1138 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 HAPLN2Q9GZV7 340 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 KCMF1Q9P0J7 381 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 ANKFY1Q9P2R3 1169 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 NCDNQ9UBB6 729 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 COQ6Q9Y2Z9 468 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 SPO11Q9Y5K1 396 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 COL4A3BPQ9Y5P4 624 aa2.95□□□□□ -1.94
CDC40-204ENST00000431461 CENPVL1A0A0U1RR11 272 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 KPNA6O60684 536 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 RAB11FIP3O75154 756 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 GLRX3O76003 335 aaKnown RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 BPIP17213 487 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 GNAT2P19087 354 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 HK1P19367 917 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 ZFP36P26651 326 aaKnown RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 LSP1P33241 339 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 RGS3P49796 1198 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 PTTG1IPP53801 180 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 NPEPPSP55786 919 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 SLC6A3Q01959 620 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 DSG1Q02413 1049 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 KRT40Q6A162 431 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 TIGD7Q6NT04 549 aaPredicted RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 BMP8AQ7Z5Y6 402 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 AFAP1L2Q8N4X5 818 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 SMC1BQ8NDV3 1235 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 ATL2Q8NHH9 583 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 SCARB1Q8WTV0 552 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 LEO1Q8WVC0 666 aaPredicted RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 ARL8AQ96BM9 186 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 WDR92Q96MX6 357 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 FAM193BQ96PV7 902 aaPredicted RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 PUS7Q96PZ0 661 aaKnown RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 PDCD2LQ9BRP1 358 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 PUS7LQ9H0K6 701 aaKnown RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 ZNF768Q9H5H4 540 aaKnown RBP2.94□□□□□ -1.94
CDC40-204ENST00000431461 ATP8A1Q9Y2Q0 1164 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 SPEF1Q9Y4P9 236 aa2.94□□□□□ -1.94
CDC40-204ENST00000431461 TMEM200CA6NKL6 621 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 AHRRA9YTQ3 701 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 MTSS1O43312 755 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 SCAF4O95104 1147 aaKnown RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 HSP90B1P14625 803 aaKnown RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 ZEB1P37275 1124 aaPredicted RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 USP14P54578 494 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 ELLP55199 621 aaPredicted RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 ZNF460Q14592 562 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 ATP13A4Q4VNC1 1196 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms