RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 TMEM179Q6ZVK1 233 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 CPLX4Q7Z7G2 160 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 FBXO25Q8TCJ0 367 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 SGIP1Q9BQI5 828 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 AMNQ9BXJ7 453 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 TRIM31Q9BZY9 425 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 THAP2Q9H0W7 228 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 PRDM16Q9HAZ2 1276 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 NOD2Q9HC29 1040 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 TMOD2Q9NZR1 351 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 APEX2Q9UBZ4 518 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 ALG6Q9Y672 507 aa9.51□□□□□ -0.89
CDH13-202ENST00000428848 IGLV3-22A0A075B6J6 115 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ECE2O60344 883 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CTNND1O60716 968 aaKnown RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 SNUPNO95149 360 aaKnown RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 GSTA1P08263 222 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ABCB4P21439 1286 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 RFX1P22670 979 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CTTNQ14247 550 aaKnown RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 ZNF568Q3ZCX4 644 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 MSL1Q68DK7 614 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 C11orf63Q6NUN7 778 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 BTNL9Q6UXG8 535 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ZNF720Q7Z2F6 126 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SLC9A9Q8IVB4 645 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 RHOT2Q8IXI1 618 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 PRELID2Q8N945 189 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CCDC197Q8NCU1 140 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CYP2W1Q8TAV3 490 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SPDL1Q96EA4 605 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 STRA6Q9BX79 667 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 INTS2Q9H0H0 1204 aaKnown RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 TUFT1Q9NNX1 390 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 RGL1Q9NZL6 768 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SNX24Q9Y343 169 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SYNGAP1Q96PV0 1343 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 MIF4GDA9UHW6 222 aaKnown RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 ENTPD3O75355 529 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SLITRK3O94933 977 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 FAM13AO94988 1023 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 AGTP01019 485 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CHRNA3P32297 505 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 GBP1P32455 592 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 PEX5P50542 639 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 PLTPP55058 493 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ELF3P78545 371 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 NFIAQ12857 509 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 MTA1Q13330 715 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ZNF211Q13398 564 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 COG2Q14746 738 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CYP1B1Q16678 543 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 ZC2HC1CQ53FD0 456 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 DACT2Q5SW24 774 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 PHLDB3Q6NSJ2 640 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 OTOP1Q7RTM1 612 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 CROCCP2Q86T23 111 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 MICAL1Q8TDZ2 1067 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 RPS6KC1Q96S38 1066 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 AGPAT1Q99943 283 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 DBNDD1Q9H9R9 158 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 AGPAT3Q9NRZ7 376 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDH13-202ENST00000428848 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 RASAL2Q9UJF2 1139 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 SLC12A4Q9UP95 1085 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 TRPC6Q9Y210 931 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 C15orf41Q9Y2V0 281 aa9.5□□□□□ -0.89
CDH13-202ENST00000428848 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
CDH13-202ENST00000428848 PFASO15067 1338 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 ZNFX1Q9P2E3 1918 aaKnown RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 DCAF8L1A6NGE4 600 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 PODXLO00592 558 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 MTA2O94776 668 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 GGPS1O95749 300 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 MMEP08473 750 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 MUTP22033 750 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 RPL21P46778 160 aaKnown RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 IFI35P80217 286 aaPredicted RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 PRPF4BQ13523 1007 aaKnown RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 SLC29A2Q14542 456 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 ZC3H12AQ5D1E8 599 aaKnown RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 UBAP2Q5T6F2 1119 aaKnown RBP9.49□□□□□ -0.89
CDH13-202ENST00000428848 DENND2CQ68D51 928 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 AADACL2Q6P093 401 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 TTC27Q6P3X3 843 aa9.49□□□□□ -0.89
CDH13-202ENST00000428848 BZW1Q7L1Q6 419 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms